Pre_GI: BLASTP Hits

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Query: NC_003198:4453457:4490490 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 4490490, End: 4491140, Length: 651

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003198:4453457:44737534473753450773033978Salmonella enterica subsp. enterica serovar Typhi str. CT18,3e-97353
NC_006511:2677964:267872526787252679375651Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative phage terminase4e-97353
NC_016845:1773416:178959617895961790246651Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,terminase, endonuclease subunit7e-97353
NC_011205:2938356:293891629389162939566651Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853terminase, endonuclease subunit7e-97353
NC_011149:2802199:280366928036692804319651Salmonella enterica subsp. enterica serovar Agona str. SL483,terminase, endonuclease subunit5e-96350
NC_007613:761234:777260777260777910651Shigella boydii Sb227, complete genometerminase, endonuclease subunit5e-96350
NC_016857:2871689:287168928716892872342654Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74terminase-like protein1e-94345
NC_016810:2871689:287168928716892872342654Salmonella enterica subsp. enterica serovar Typhimurium strputative bacteriophage terminase1e-94345
NC_014306:1244721:126190612619061262556651Erwinia billingiae Eb661, complete genomeTerminase, endonuclease subunit2e-77288
NC_017046:2869873:287043128704312870982552Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage terminase2e-76285
NC_013956:3525711:352629435262943526938645Pantoea ananatis LMG 20103 chromosome, complete genomeM2e-73275
NC_014837:3766426:376843037684303769080651Pantoea sp. At-9b chromosome, complete genomesmall terminase subunit4e-70264
NC_010694:614985:641390641390642031642Erwinia tasmaniensis, complete genomePutative phage terminase7e-67253
NC_020260:312805:333316333316333969654Cronobacter sakazakii Sp291, complete genomesmall terminase subunit2e-47189
NC_013282:3389619:339111733911173391863747Cronobacter turicensis, complete genomeTerminase, endonuclease subunit3e-39161
NC_012917:3565268:359057535905753591234660Pectobacterium carotovorum subsp. carotovorum PC1, complete genomesmall terminase subunit9e-39159
NC_020211:4598217:459971045997104600369660Serratia marcescens WW4, complete genomephage terminase, endonuclease subunit8e-37153
NC_007963:1582089:158403715840371584702666Chromohalobacter salexigens DSM 3043, complete genomephage small terminase subunit1e-34145
NC_017047:4037674:405779340577934058449657Rahnella aquatilis HX2 chromosome, complete genomesmall terminase subunit8e-33140
NC_009648:3803622:382105738210573821776720Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative prophage small terminase subunit4e-32137
NC_014562:1698253:171339117133911713963573Pantoea vagans C9-1 chromosome, complete genomeTerminase, endonuclease subunit (GpM)2e-31135
NC_014323:992978:992978992978993697720Herbaspirillum seropedicae SmR1 chromosome, complete genomebacteriophage-related terminase3e-30131
NC_017047:1551836:157143315714331572179747Rahnella aquatilis HX2 chromosome, complete genomegpM5e-30130
NC_015061:1598920:162083216208321621488657Rahnella sp. Y9602 chromosome, complete genomesmall terminase subunit7e-30130
NC_012962:4942000:495176449517644952429666Photorhabdus asymbiotica, complete genomephage r protein [enterobacteria phage 186] gb|aac34151.1| (u32222)7e-30130
NC_012724:147454:148594148594149283690Burkholderia glumae BGR1 chromosome 1, complete genomehypothetical protein1e-29129
NC_016818:1605918:162468116246811625430750Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completePhage small terminase subunit2e-29128
NC_014228:3022903:304301130430113043673663Xenorhabdus nematophila ATCC 19061, complete genomeTerminase, endonuclease subunit (GpM)6e-29127
NC_015856:1152021:117044811704481171164717Collimonas fungivorans Ter331 chromosome, complete genomephage small terminase subunit5e-27120
NC_003902:3514000:353387035338703534589720Xanthomonas campestris pv. campestris str. ATCC 33913, completephage-related terminase3e-26118
NC_020209:3262000:327820232782023278921720Pseudomonas poae RE*1-1-14, complete genomephage P2 small terminase subunit gpM-like protein2e-23108
NC_014306:103545:123350123350124300951Erwinia billingiae Eb661, complete genomePhage terminase/endonuclease subunit4e-22104
NC_017059:3688688:369236436923643693062699Rhodospirillum photometricum DSM 122, complete genomeSmall terminase subunit (Endonuclease subunit of bacteriophage terminase)6e-22103
NC_016514:2334870:233547623354762336027552Enterobacter cloacae EcWSU1 chromosome, complete genomeSmall Terminase Subunit2e-21102
NC_012724:1892000:190773519077351908433699Burkholderia glumae BGR1 chromosome 1, complete genomeGp1, phage terminase, endonuclease subunit8e-21100
NC_008800:1870596:187059618705961871306711Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,phage terminase/endonuclease subunit1e-1893.2
NC_009656:5185704:520403752040375204774738Pseudomonas aeruginosa PA7 chromosome, complete genomeputative terminase, endonuclease subunit5e-0857.8
NC_013892:992811:100054610005461001253708Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein3e-0755.1