Pre_GI: BLASTP Hits

Some Help

Query: NC_003198:4453457:4489510 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 4489510, End: 4489725, Length: 216

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011149:2802199:280268928026892802904216Salmonella enterica subsp. enterica serovar Agona str. SL483,holin family protein6e-34142
NC_016845:1773416:179101317910131791228216Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein3e-31134
NC_007613:761234:778677778677778892216Shigella boydii Sb227, complete genomepossible secretory protein8e-28122
NC_020260:312805:334742334742334957216Cronobacter sakazakii Sp291, complete genomephage-holin-like protein2e-21101
NC_014837:3766426:376744737674473767659213Pantoea sp. At-9b chromosome, complete genomesecretory protein2e-1994.4
NC_014562:2871765:287305628730562873268213Pantoea vagans C9-1 chromosome, complete genomepossible secretory protein6e-1992.8
NC_017047:4037674:405922140592214059436216Rahnella aquatilis HX2 chromosome, complete genomeprophage Hp1 family holin7e-1269.3
NC_015061:1598920:162226316222631622472210Rahnella sp. Y9602 chromosome, complete genomeprophage Hp1 family holin7e-1165.9
NC_020211:4598217:459871345987134598922210Serratia marcescens WW4, complete genomeprophage Hp1 family holin1e-0858.9
NC_017047:1551836:157296315729631573184222Rahnella aquatilis HX2 chromosome, complete genomeprophage Hp1 family holin1e-0755.1
NC_020064:871338:892926892926893132207Serratia marcescens FGI94, complete genomeholin, HP1 family3e-0753.9
NC_016818:1605918:162622616262261626435210Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completehypothetical protein9e-0752.4