Pre_GI: BLASTP Hits

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Query: NC_003198:4453457:4481369 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 4481369, End: 4481590, Length: 222

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002655:301940:306856306856307446591Escherichia coli O157:H7 EDL933, complete genomeDNA invertase from prophage CP-933H1e-23108
NC_013008:306953:310772310772311326555Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeDNA invertase from prophage CP-933H2e-23107
NC_011353:305820:310772310772311326555Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeDNA-invertase2e-23107
NC_002695:301939:306891306891307445555Escherichia coli O157:H7 str. Sakai, complete genomeDNA-invertase2e-23107
NC_000913:1188999:120890812089081209462555Escherichia coli K12, complete genomee14 prophage; site-specific DNA recombinase2e-23107
AC_000091:1191353:121126212112621211816555Escherichia coli W3110 DNA, complete genomesite-specific DNA recombinase2e-23107
NC_020063:2531643:254405725440572544623567Enterobacteriaceae bacterium strain FGI 57, complete genomesite-specific recombinase, DNA invertase Pin1e-22105
NC_003198:1867456:188867418886741888886213Salmonella enterica subsp. enterica serovar Typhi str. CT18,2e-22104
NC_012880:3529017:354256735425673543136570Dickeya dadantii Ech703, complete genomeResolvase domain protein1e-22104
NC_007712:1182518:119172311917231192313591Sodalis glossinidius str. 'morsitans', complete genomephage DNA-invertase9e-1475.5
NC_011094:2791719:282196128219612822533573Salmonella enterica subsp. enterica serovar Schwarzengrund strDNA-invertase hin2e-1271.2
NC_012125:2826624:285008028500802850628549Salmonella enterica subsp. enterica serovar Paratyphi C strainDNA-invertase Hin6e-1269.7
NC_006905:2857699:286979628697962870368573Salmonella enterica subsp. enterica serovar Choleraesuis strH inversion: regulation of flagellar gene expression by site-specific inversion of DNA5e-1269.7
NC_003197:2894344:291484229148422915414573Salmonella typhimurium LT2, complete genomeDNA-invertase Hin5e-1269.7
NC_016856:2896630:293507729350772935649573Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SDNA-invertase Hin5e-1269.7
NC_016860:2917910:293840829384082938980573Salmonella enterica subsp. enterica serovar Typhimurium strDNA-invertase Hin5e-1269.7
NC_016863:2844883:288333028833302883902573Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1DNA-invertase Hin5e-1269.7
NC_011080:2870428:289148128914812892047567Salmonella enterica subsp. enterica serovar Newport str. SL254,DNA-invertase hin5e-1269.7
NC_011083:2847318:288963028896302890193564Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,DNA-invertase hin8e-1268.9
NC_011294:1220526:125397912539791254122144Salmonella enterica subsp. enterica serovar Enteritidis str8e-1268.9
NC_010102:2862178:287925728792572879829573Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein9e-1268.9
NC_016810:1903426:191923119192311919377147Salmonella enterica subsp. enterica serovar Typhimurium str9e-1268.9
NC_011274:1299475:131816713181671318313147Salmonella enterica subsp. enterica serovar Gallinarum str. 287/919e-1268.9
NC_011283:2836000:289252528925252893121597Klebsiella pneumoniae 342 chromosome, complete genomeDNA-invertase hin4e-1166.6
NC_009648:1541699:159418415941841594462279Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative invertase5e-1166.2
NC_013850:2182337:224002122400212240590570Klebsiella variicola At-22 chromosome, complete genomeResolvase domain protein9e-1165.5
NC_020181:5217000:524391752439175244486570Enterobacter aerogenes EA1509E, complete genomeDNA-invertase1e-1065.5
NC_004349:3938:167331673317290558Shewanella oneidensis MR-1 plasmid pMR-1, complete sequenceISSod9, DNA-invertase1e-1065.1
NC_018080:3055358:307262430726243073181558Pseudomonas aeruginosa DK2 chromosome, complete genomeresolvase domain-containing protein2e-1064.3
NC_008345:4107847:413391541339154134481567Shewanella frigidimarina NCIMB 400, complete genomeResolvase, N-terminal domain protein4e-1063.5
NC_008786:1553833:156447815644781565035558Verminephrobacter eiseniae EF01-2, complete genomeResolvase, N-terminal domain6e-1062.8
NC_011294:1220526:124406512440651244223159Salmonella enterica subsp. enterica serovar Enteritidis str2e-0960.8
NC_011274:1299475:130824413082441308399156Salmonella enterica subsp. enterica serovar Gallinarum str. 287/912e-0960.8
NC_011205:2137696:214709421470942147315222Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein3e-0960.5
NC_011294:2009388:201878720187872019008222Salmonella enterica subsp. enterica serovar Enteritidis strphage encoded DNA-binding protein3e-0960.5
NC_016856:2085283:209390620939062094127222Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein3e-0960.5
NC_016863:2029340:204209820420982042319222Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein3e-0960.5
NC_011205:1391971:139716613971661397318153Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853DNA invertase7e-0959.3
NC_016810:2027311:204007220400722040263192Salmonella enterica subsp. enterica serovar Typhimurium str1e-0858.5
NC_017208:694500:711042711042711614573Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeDNA integration/recombination/inversion protein1e-0755.5
NC_016863:1905454:192125919212591921384126Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein2e-0754.7
NC_008541:472643:491091491091491672582Arthrobacter sp. FB24 chromosome 1, complete sequenceResolvase3e-0753.5
NC_013446:4281250:429116142911614291727567Comamonas testosteroni CNB-2, complete genomeResolvase-like protein9e-0752.4
NC_013892:1503162:154003115400311540255225Xenorhabdus bovienii SS-2004 chromosome, complete genomeinvertase-like protein2e-0651.2
NC_007613:1353500:137085113708511371450600Shigella boydii Sb227, complete genomeputative DNA-invertase6e-0649.7
NC_014550:889500:914521914521915093573Arthrobacter arilaitensis Re117, complete genomeputative resolvase9e-0648.9