Pre_GI: BLASTP Hits

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Query: NC_003198:4453457:4475820 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 4475820, End: 4476305, Length: 486

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003198:4453457:44737534473753450773033978Salmonella enterica subsp. enterica serovar Typhi str. CT18,1e-83308
NC_009436:1466580:148955414895541490039486Enterobacter sp. 638, complete genomephage P2 GpU family protein4e-74276
NC_014837:3739408:375496637549663755451486Pantoea sp. At-9b chromosome, complete genomeP2 GpU family protein7e-63239
NC_007712:3163000:318404331840433184507465Sodalis glossinidius str. 'morsitans', complete genomeputative phage tail protein1e-50198
NC_007712:1997010:201266220126622013126465Sodalis glossinidius str. 'morsitans', complete genomeputative phage tail protein1e-50198
NC_014228:3022903:302824430282443028708465Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein1e-50198
NC_010465:2582080:258500725850072585471465Yersinia pseudotuberculosis YPIII, complete genomeP2 GpU family protein2e-47187
NC_006155:2084669:209867720986772099162486Yersinia pseudotuberculosis IP 32953, complete genomeputative phage tail protein3e-46183
NC_020064:871338:882285882285882767483Serratia marcescens FGI94, complete genomephage protein U7e-42169
NC_015410:2351464:238451223845122384952441Pseudomonas mendocina NK-01 chromosome, complete genomephage P2 GpU protein3e-41167
NC_020181:5130513:516738451673845167869486Enterobacter aerogenes EA1509E, complete genomePhage-related tail protein2e-39161
NC_012779:3016327:302355130235513023979429Edwardsiella ictaluri 93-146, complete genomehypothetical protein4e-39160
NC_009648:3803622:380478838047883805267480Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative prophage tail protein1e-38158
NC_012560:3771861:378625137862513786694444Azotobacter vinelandii DJ, complete genomePhage P2 GpU protein1e-38158
NC_021150:3771860:378625037862503786693444Azotobacter vinelandii CA6, complete genomePhage P2 GpU protein1e-38158
NC_016816:674171:678437678437678940504Pantoea ananatis LMG 5342, complete genomeP2 GpU family protein1e-37155
NC_012880:2480000:248836524883652488859495Dickeya dadantii Ech703, complete genomeP2 GpU family protein8e-37152
NC_007963:1552761:156822515682251568668444Chromohalobacter salexigens DSM 3043, complete genomephage P2 GpU3e-36150
NC_009801:995396:101492410149241015403480Escherichia coli E24377A, complete genomephage protein gpU2e-35148
NC_007613:1353500:137033413703341370822489Shigella boydii Sb227, complete genomeputative tail protein3e-35147
NC_008781:3508784:351572135157213516170450Polaromonas naphthalenivorans CJ2, complete genomephage P2 GpU family protein5e-34143
NC_014323:961825:978063978063978590528Herbaspirillum seropedicae SmR1 chromosome, complete genomebacteriophage P2 phage-related tail U protein2e-33140
NC_015563:4959843:496628349662834966741459Delftia sp. Cs1-4 chromosome, complete genomeP2 GpU family protein4e-31133
NC_015856:1182974:118820811882081188765558Collimonas fungivorans Ter331 chromosome, complete genomephage p2 GpU4e-30130
NC_003902:3544743:354808035480803548481402Xanthomonas campestris pv. campestris str. ATCC 33913, completephage-related tail protein1e-27121
NC_012724:1914740:192413919241391924636498Burkholderia glumae BGR1 chromosome 1, complete genomePhage protein U1e-24112
NC_016845:4077293:408327340832734083599327Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative prophage tail protein1e-22105
NC_012881:2310141:232552323255232325903381Desulfovibrio salexigens DSM 2638, complete genomeP2 GpU family protein2e-1581.3
NC_007604:743738:746590746590747510921Synechococcus elongatus PCC 7942, complete genomehypothetical protein1e-1479
NC_006576:856014:873361873361874281921Synechococcus elongatus PCC 6301, complete genomehypothetical protein1e-1479
NC_017033:1089579:109284410928441093686843Frateuria aurantia DSM 6220 chromosome, complete genomephage protein U2e-1478.6
NC_012416:753500:757164757164757580417Wolbachia sp. wRi, complete genometail protein U, putative8e-1269.7
NC_011415:2248417:226432222643222264750429Escherichia coli SE11 chromosome, complete genomehypothetical protein2e-1064.7
NC_009832:2211154:223880522388052239263459Serratia proteamaculans 568, complete genomeP2 GpU family protein2e-0961.2
NC_004129:2234851:223742722374272238272846Pseudomonas fluorescens Pf-5, complete genomepyocin R2_PP, tail formation protein5e-0857
NC_010161:1949637:197130819713081971793486Bartonella tribocorum CIP 105476, complete genomeputative phage tail protein1e-0755.5
NC_015381:2109500:211267021126702113425756Burkholderia gladioli BSR3 chromosome 1, complete sequencePhage P2 GpU family protein1e-0755.5
NC_010161:1324381:134590913459091346379471Bartonella tribocorum CIP 105476, complete genomeputative phage tail protein1e-0755.5
NC_010161:1914000:193530519353051935775471Bartonella tribocorum CIP 105476, complete genomeputative phage tail protein1e-0755.5
NC_015381:3457784:347469734746973475452756Burkholderia gladioli BSR3 chromosome 1, complete sequencePhage P2 GpU family protein3e-0754.7
NC_015381:3091500:311565431156543116532879Burkholderia gladioli BSR3 chromosome 1, complete sequencePhage P2 GpU family protein3e-0754.7
NC_012724:3070386:308492230849223085800879Burkholderia glumae BGR1 chromosome 1, complete genomePhage P2 GpU family protein2e-0754.7
NC_016830:4999946:501770450177045018549846Pseudomonas fluorescens F113 chromosome, complete genomephage protein U3e-0754.3
NC_012846:1837924:185904118590411859502462Bartonella grahamii as4aup, complete genomephage tail protein U54e-0753.9
NC_008390:2018201:203723820372382038116879Burkholderia cepacia AMMD chromosome 1, complete sequencephage P2 GpU family protein8e-0752.8