Pre_GI: BLASTP Hits

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Query: NC_003198:4453457:4474437 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 4474437, End: 4474655, Length: 219

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003198:4453457:44737534473753450773033978Salmonella enterica subsp. enterica serovar Typhi str. CT18,1e-39161
NC_016612:3361802:337305933730593373277219Klebsiella oxytoca KCTC 1686 chromosome, complete genomeprophage P2 OGR-like protein9e-1992
NC_014837:3739408:375358937535893753807219Pantoea sp. At-9b chromosome, complete genometranscriptional activator Ogr/delta1e-1788.2
NC_009801:995396:101664810166481016866219Escherichia coli E24377A, complete genomephage transcriptional activator, Ogr/Delta4e-1786.7
NC_007712:3163000:318267231826723182890219Sodalis glossinidius str. 'morsitans', complete genomeputative phage late gene regulator6e-1786.3
NC_006155:2084669:209720720972072097422216Yersinia pseudotuberculosis IP 32953, complete genomeprophage p2 ogr protein1e-1685.1
NC_010465:2582080:258663725866372586852216Yersinia pseudotuberculosis YPIII, complete genometranscriptional activator Ogr/delta2e-1580.9
NC_015224:2061951:207877820787782078993216Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,Phage transcriptional activator, Ogr/Delta2e-1478.2
NC_016835:128757:133759133759133980222Rahnella aquatilis CIP 78.65 = ATCC 33071 plasmid pRahaq201,Ogr/Delta-like zinc finger7e-1475.9
NC_020064:871338:880827880827881060234Serratia marcescens FGI94, complete genomeOgr/Delta-like zinc finger2e-1374.3
NC_016816:674171:680173680173680394222Pantoea ananatis LMG 5342, complete genometranscriptional activator Ogr/delta2e-1271.2
NC_012880:2480000:249015824901582490352195Dickeya dadantii Ech703, complete genometranscriptional activator Ogr/delta2e-1167.8
NC_011080:2870428:288319228831922883437246Salmonella enterica subsp. enterica serovar Newport str. SL254,phage transcriptional activator, Ogr/delta7e-1165.9
NC_010468:49074:512145121451456243Escherichia coli ATCC 8739, complete genometranscriptional activator Ogr/delta3e-1063.5
NC_011147:4460726:446048444604844460729246Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein7e-1062.8
NC_010102:2862178:286276128627612863006246Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein7e-1062.8
NC_006511:4465495:446525344652534465498246Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein7e-1062.8
NC_016810:2871689:289502528950252895267243Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage gene regulatory protein1e-0858.9
NC_004547:3866439:387425338742533874501249Erwinia carotovora subsp. atroseptica SCRI1043, complete genomebacteriophage regulatory protein1e-0858.5
NC_012917:833721:839975839975840223249Pectobacterium carotovorum subsp. carotovorum PC1, complete genometranscriptional activator Ogr/delta2e-0858.2
NC_013508:3593000:361099636109963611235240Edwardsiella tarda EIB202, complete genomebacteriophage gene regulatory protein2e-0857.8
NC_012917:3684840:369156636915663691814249Pectobacterium carotovorum subsp. carotovorum PC1, complete genometranscriptional activator Ogr/delta3e-0857.4
NC_017047:3174588:319277031927703192973204Rahnella aquatilis HX2 chromosome, complete genometranscriptional activator Ogr/delta7e-0855.8
NC_007347:2421942:242324224232422423535294Ralstonia eutropha JMP134 chromosome 1, complete sequencePhage transcriptional activator, Ogr/Delta7e-0855.8
NC_014306:4901390:494241749424174942689273Erwinia billingiae Eb661, complete genomephage transcriptional activator, Ogr/Delta8e-0855.8
NC_009436:2056000:206276020627602062963204Enterobacter sp. 638, complete genome9e-0855.5
NC_016845:575123:588240588240588485246Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,phage transcriptional activator, Ogr/delta1e-0755.5
NC_021066:5342127:536065053606505360895246Raoultella ornithinolytica B6, complete genomephage transcriptional activator, Ogr/delta1e-0755.5
NC_004547:442927:473425473425473673249Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative bacteriophage regulatory protein1e-0755.5
NC_020211:996497:100815510081551008409255Serratia marcescens WW4, complete genomebacteriophage regulatory protein2e-0755.1
NC_009436:3367194:337924033792403379503264Enterobacter sp. 638, complete genomephage transcriptional activator, Ogr/delta2e-0754.7
NC_012856:3270709:328972332897233289989267Ralstonia pickettii 12D chromosome 1, complete genometranscriptional activator Ogr/delta2e-0754.3
NC_003295:998000:101281110128111013032222Ralstonia solanacearum GMI1000, complete genomePUTATIVE BACTERIOPHAGE TRANSCRIPTIONAL ACTIVATOR-RELATED TRANSCRIPTION REGULATOR PROTEIN3e-0753.9
NC_013956:4326388:433082043308204331095276Pantoea ananatis LMG 20103 chromosome, complete genomeB3e-0753.9
NC_014306:4376012:441318944131894413461273Erwinia billingiae Eb661, complete genomePutative Ogr family phage transcription activator4e-0753.5
NC_009778:567000:598018598018598269252Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein8e-0752.4
NC_016628:373815:391554391554391790237Vibrio furnissii NCTC 11218 chromosome 2, complete sequencePhage transcriptional activator, Ogr/Delta2e-0651.6
NC_014121:677799:689843689843690061219Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completebacteriophage gene regulatory protein8e-0649.3