Pre_GI: BLASTP Hits

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Query: NC_003198:4453457:4471619 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 4471619, End: 4471978, Length: 360

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:4425330:444352544435254443851327Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein3e-59226
NC_012125:4536383:455461445546144554940327Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein3e-59226
NC_009832:426993:442525442525443127603Serratia proteamaculans 568, complete genomehypothetical protein3e-23107
NC_009832:4564752:457988245798824580484603Serratia proteamaculans 568, complete genomehypothetical protein5e-23106
NC_010170:1103224:111786011178601118213354Bordetella petrii, complete genomehypothetical protein5e-23106
NC_014029:331919:389174389174389776603Yersinia pestis Z176003 chromosome, complete genomehypothetical protein1e-22105
NC_012962:3864000:386915238691523869484333Photorhabdus asymbiotica, complete genomehypothetical protein7e-23105
NC_009832:4482500:449905744990574499659603Serratia proteamaculans 568, complete genomehypothetical protein6e-23105
NC_015566:345084:370976370976371578603Serratia sp. AS12 chromosome, complete genomehypothetical protein2e-22104
NC_015567:346500:371162371162371764603Serratia sp. AS9 chromosome, complete genomehypothetical protein2e-22104
NC_002488:1638946:168041216804121680765354Xylella fastidiosa 9a5c, complete genomehypothetical protein6e-22102
NC_008782:1483155:149775014977501498103354Acidovorax sp. JS42, complete genomehypothetical protein2e-21101
NC_010501:3671517:367651736765173676882366Pseudomonas putida W619, complete genomehypothetical protein4e-21100
NC_008752:585884:595876595876596304429Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein1e-2098.2
NC_008782:2326439:236263723626372363002366Acidovorax sp. JS42, complete genomehypothetical protein1e-2098.2
NC_010170:1498253:151775615177561518109354Bordetella petrii, complete genomehypothetical protein3e-2097.1
NC_015733:2581324:262918126291812629585405Pseudomonas putida S16 chromosome, complete genomehypothetical protein3e-2097.1
NC_017986:409899:413919413919414299381Pseudomonas putida ND6 chromosome, complete genomehypothetical protein2e-1994
NC_013421:1780722:179215817921581792523366Pectobacterium wasabiae WPP163, complete genomehypothetical protein1e-1891.7
NC_009512:3334579:333964833396483340013366Pseudomonas putida F1, complete genomehypothetical protein3e-1890.1
NC_016845:4498097:450651645065164507121606Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein2e-1580.9
NC_008752:585884:593399593399593767369Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein1e-0755.5