Pre_GI: BLASTP Hits

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Query: NC_003198:4453457:4467128 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 4467128, End: 4467586, Length: 459

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:4425330:443900144390014439459459Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-68258
NC_012125:4536383:455008945500894550547459Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein1e-68258
NC_013421:701005:731811731811732296486Pectobacterium wasabiae WPP163, complete genomehypothetical protein1e-38158
NC_012962:3864000:387260238726023873075474Photorhabdus asymbiotica, complete genomehypothetical protein1e-35148
NC_004547:639726:654599654599655084486Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein1e-35148