Pre_GI: BLASTP Hits

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Query: NC_003198:4453457:4466173 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 4466173, End: 4466757, Length: 585

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:4425330:443817844381784438630453Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein3e-78290
NC_012125:4536383:454927745492774549678402Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-68258
NC_005126:1315474:134152613415261341924399Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein1e-26119
NC_012962:3864000:387344938734493873835387Photorhabdus asymbiotica, complete genomehypothetical protein1e-25115
NC_004547:639726:653663653663654259597Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein5e-21100
NC_013421:701005:731015731015731470456Pectobacterium wasabiae WPP163, complete genomehypothetical protein4e-1994.4