Pre_GI: BLASTP Hits

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Query: NC_003198:4453457:4461477 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 4461477, End: 4462019, Length: 543

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:4425330:443335044333504433892543Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-103374
NC_012125:4536383:454440245444024544944543Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-103374
NC_011294:4560902:458505445850544585662609Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein3e-78290
NC_011080:4703266:472689447268944727502609Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein3e-78290
NC_011147:4460726:449397844939784494586609Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein5e-78289
NC_004631:4687270:470440647044064705014609Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-77288
NC_011205:4718239:474237947423794742987609Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein2e-77288
NC_010102:4745949:476188547618854762493609Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-77288
NC_011274:4538722:456287245628724563480609Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein2e-77287
NC_012125:4716000:474248547424854743093609Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein3e-77287
NC_006905:4638707:466517046651704665778609Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein1e-76285
NC_011415:308825:315173315173315781609Escherichia coli SE11 chromosome, complete genomehypothetical protein2e-73274
NC_015761:4355335:436955643695564370164609Salmonella bongori NCTC 12419, complete genomehypothetical protein2e-72271