Pre_GI: BLASTP Hits

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Query: NC_003198:4453457:4460652 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 4460652, End: 4461266, Length: 615

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:4425330:443249844324984433139642Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein6e-117419
NC_012125:4536383:454357745435774544191615Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein8e-117419
CU928145:3360967:339306533930653393709645Escherichia coli 55989 chromosome, complete genometranscriptional regulator IbrB5e-95346
NC_011748:3360967:339306533930653393709645Escherichia coli 55989, complete genometranscriptional regulator IbrB5e-95346
NC_002655:1103991:112718511271851127823639Escherichia coli O157:H7 EDL933, complete genomehypothetical protein1e-93342
NC_004431:2304280:232484223248422325486645Escherichia coli CFT073, complete genomeHypothetical protein ybdM5e-93340
NC_007946:2155454:217600721760072176651645Escherichia coli UTI89, complete genomehypothetical protein YbdM5e-93340
NC_008253:2056734:207731920773192077963645Escherichia coli 536, complete genomehypothetical protein5e-93340
NC_010498:1117938:114637011463701147014645Escherichia coli SMS-3-5, complete genome3e-92337
NC_011750:1094000:111078111107811111275495Escherichia coli IAI39 chromosome, complete genome4e-78290
CP002797:2062006:207094420709442071438495Escherichia coli NA114, complete genomehypothetical protein4e-78290
NC_011742:3245500:325222032522203252783564Escherichia coli S88 chromosome, complete genome9e-75279
NC_008563:3332114:333743633374363337999564Escherichia coli APEC O1, complete genomehypothetical protein9e-75279
NC_004431:4955658:496228449622844962847564Escherichia coli CFT073, complete genomeHypothetical protein ybdM9e-75279
NC_015566:1206500:122417112241711224788618Serratia sp. AS12 chromosome, complete genomeParB domain-containing protein nuclease9e-74276
NC_015567:1206727:122435612243561224973618Serratia sp. AS9 chromosome, complete genomeParB domain-containing protein nuclease9e-74276
NC_012779:2856051:287655228765522877181630Edwardsiella ictaluri 93-146, complete genomeIbrB6e-67253
NC_012779:2856051:286924828692482869880633Edwardsiella ictaluri 93-146, complete genomehypothetical protein2e-57221
NC_010170:1417615:142397114239711424603633Bordetella petrii, complete genomehypothetical protein1e-55215
NC_014624:1675500:173395517339551734491537Eubacterium limosum KIST612 chromosome, complete genomeimmunoglobulin-binding regulator B3e-37154
NC_014933:3015678:303458330345833035119537Bacteroides helcogenes P 36-108 chromosome, complete genometranscriptional regulator5e-36150
NC_004668:546142:570062570062570595534Enterococcus faecalis V583, complete genomeParB-like nuclease domain protein2e-34145
NC_009614:4565620:457340945734094573930522Bacteroides vulgatus ATCC 8482 chromosome, complete genometranscriptional regulator3e-34144
NC_016776:5174606:524234452423445242865522Bacteroides fragilis 638R, complete genomehypothetical protein3e-34144
NC_016776:2411154:244351324435132444025513Bacteroides fragilis 638R, complete genomehypothetical protein7e-34143
NC_004663:2859158:288469928846992885211513Bacteroides thetaiotaomicron VPI-5482, complete genomehypothetical protein7e-34143
NC_014618:4114004:414571541457154146173459Enterobacter cloacae SCF1 chromosome, complete genomeimmunoglobulin-binding regulator5e-23107
NC_011742:3245500:325213832521383252293156Escherichia coli S88 chromosome, complete genome2e-1168.6
NC_004431:4955658:496220249622024962357156Escherichia coli CFT073, complete genomehypothetical protein2e-1168.6