Pre_GI: BLASTP Hits

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Query: NC_003198:4453457:4459393 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 4459393, End: 4460640, Length: 1248

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:4425330:4431266443126644325131248Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein0870
NC_012125:4536383:4542318454231845435651248Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein0870
NC_010498:1117938:1145153114515311463851233Escherichia coli SMS-3-5, complete genomeimmunoglobulin-binding regulator A-like protein0759
NC_004431:2304280:2325471232547123267601290Escherichia coli CFT073, complete genomeHypothetical protein ybdN0759
NC_007946:2155454:2176636217663621779251290Escherichia coli UTI89, complete genomehypothetical protein YbdN0759
NC_008253:2056734:2077948207794820791711224Escherichia coli 536, complete genomeputative phosphoadenosine phosphosulfate reductase0758
CP002797:2062006:2071573207157320728591287Escherichia coli NA114, complete genomehypothetical protein0758
NC_008563:3332114:3337984333798433392161233Escherichia coli APEC O1, complete genomehypothetical protein0758
NC_004431:4955658:4962832496283249640641233Escherichia coli CFT073, complete genomeHypothetical protein ybdN0758
NC_011742:3245500:3252768325276832540001233Escherichia coli S88 chromosome, complete genomeimmunoglobulin-binding regulator0758
NC_002655:1103991:1125968112596811272001233Escherichia coli O157:H7 EDL933, complete genomehypothetical protein0754
NC_011748:3360967:3393694339369433949261233Escherichia coli 55989, complete genomeimmunoglobulin-binding regulator0745
CU928145:3360967:3393694339369433949261233Escherichia coli 55989 chromosome, complete genomeimmunoglobulin-binding regulator0745
NC_011750:1094000:1108148110814811093321185Escherichia coli IAI39 chromosome, complete genomeimmunoglobulin-binding regulator0729
NC_015566:1206500:1222948122294812241741227Serratia sp. AS12 chromosome, complete genomePP-loop domain-containing protein0646
NC_015567:1206727:1223133122313312243591227Serratia sp. AS9 chromosome, complete genomePP-loop domain-containing protein0646
NC_012779:2856051:2877183287718328783941212Edwardsiella ictaluri 93-146, complete genomePhosphoadenosine phosphosulfate reductase family protein8e-168590
NC_012779:2856051:2869877286987728710851209Edwardsiella ictaluri 93-146, complete genomeIbrA3e-158558
NC_010170:1417615:1425030142503014263401311Bordetella petrii, complete genomehypothetical protein1e-73277
NC_014933:3015678:3035116303511630364051290Bacteroides helcogenes P 36-108 chromosome, complete genomephosphoadenosine phosphosulfate reductase8e-54211
NC_016776:5174606:5242871524287152441511281Bacteroides fragilis 638R, complete genomehypothetical protein1e-52207
NC_004663:2859158:2885216288521628864901275Bacteroides thetaiotaomicron VPI-5482, complete genomehypothetical protein3e-52206
NC_009614:4565620:4573936457393645752161281Bacteroides vulgatus ATCC 8482 chromosome, complete genomehypothetical protein4e-52205
NC_004668:546142:5710045710045722751272Enterococcus faecalis V583, complete genomehypothetical protein5e-52205
NC_014624:1675500:1734484173448417358181335Eubacterium limosum KIST612 chromosome, complete genomeCo-activator of prophage gene expression IbrA2e-51203
NC_009613:912000:9340749340749352131140Flavobacterium psychrophilum JIP02/86, complete genomehypothetical protein5e-30132