Pre_GI: BLASTP Hits

Some Help

Query: NC_003198:4453457:4458746 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 4458746, End: 4459105, Length: 360

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:4425330:443061944306194430741123Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein5e-1683.2
NC_012125:4536383:454167245416724541794123Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein3e-1477