Pre_GI: BLASTP Hits

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Query: NC_003198:4453457:4456256 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 4456256, End: 4456588, Length: 333

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:4536383:453918245391824539514333Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-49193
NC_016832:4425330:442827944282794428461183Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-2098.6
NC_012779:346998:358123358123358476354Edwardsiella ictaluri 93-146, complete genomehypothetical protein4e-1166.6
NC_004547:639726:642137642137642508372Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein3e-0857
NC_009832:4564752:461736246173624617733372Serratia proteamaculans 568, complete genomehypothetical protein7e-0856.2
NC_015566:345084:349400349400349771372Serratia sp. AS12 chromosome, complete genomehypothetical protein1e-0755.1
NC_015567:346500:349565349565349936372Serratia sp. AS9 chromosome, complete genomehypothetical protein1e-0755.1