Pre_GI: BLASTP Hits

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Query: NC_003198:3881221:3899797 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 3899797, End: 3900141, Length: 345

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:3858815:387403938740393874428390Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein6e-61232
NC_016863:3905875:391028639102863910630345Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein2e-59227
NC_016860:3964000:397188339718833972227345Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-59227
NC_012947:2898179:290999529099952910327333Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein3e-25113