Pre_GI: BLASTP Hits

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Query: NC_003198:3881221:3897656 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 3897656, End: 3898490, Length: 835

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005126:142500:143880143880144713834Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein9e-151532
NC_016902:4236680:423714542371454237978834Escherichia coli KO11FL chromosome, complete genomehypothetical protein8e-142503
CP002516:4236680:423714542371454237978834Escherichia coli KO11, complete genomehypothetical protein8e-142503
NC_015761:299386:323688323688324521834Salmonella bongori NCTC 12419, complete genomeprophage protein5e-139493
NC_011601:4856717:486895248689524869785834Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein9e-135479
NC_014618:690056:724777724777725610834Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein1e-121435
NC_016514:506611:526583526583527515933Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein2e-119428
NC_015224:4386599:440557344055734406433861Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein4e-119427
NC_012917:3241196:326731932673193268152834Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein1e-117422
NC_013971:3296272:330297433029743303807834Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein2e-117421
NC_013961:441719:467493467493468326834Erwinia amylovora, complete genomehypothetical protein2e-117421
NC_009436:522649:543427543427544260834Enterobacter sp. 638, complete genomehypothetical protein3e-116417
NC_009832:1946401:194640119464011947234834Serratia proteamaculans 568, complete genomehypothetical protein7e-106383
NC_012947:44512:483424834249187846Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein5e-91334
NC_011083:4547825:456346945634694564338870Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein1e-90333
NC_004431:4319152:434094043409404341782843Escherichia coli CFT073, complete genomehypothetical protein1e-88326
NC_008253:3161311:317591431759143176756843Escherichia coli 536, complete genomehypothetical protein2e-87322
NC_011750:4390000:441412244141224414964843Escherichia coli IAI39 chromosome, complete genomehypothetical protein4e-86318
NC_013364:3701895:375851637585163759358843Escherichia coli O111:H- str. 11128, complete genomehypothetical protein5e-86317
NC_013353:3669500:367350536735053674347843Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein8e-86317
AP010958:3669500:367350536735053674347843Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein8e-86317
NC_004741:3041294:308910530891053089947843Shigella flexneri 2a str. 2457T, complete genomehypothetical protein1e-85316
NC_004337:3049118:309827830982783099120843Shigella flexneri 2a str. 301, complete genomehypothetical protein1e-85316
NC_017328:3088907:313798331379833138825843Shigella flexneri 2002017 chromosome, complete genomehypothetical protein1e-85316
NC_007946:1119000:114154011415401142382843Escherichia coli UTI89, complete genomehypothetical protein7e-84310
NC_008253:334467:360025360025360849825Escherichia coli 536, complete genomehypothetical protein5e-80297
NC_015663:1869000:187050918705091871129621Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein2e-55215
NC_011745:3405520:342622934262293426798570Escherichia coli ED1a chromosome, complete genome1e-53209
NC_016863:3905875:391249539124953912845351Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein4e-47188
NC_016860:3964000:397409539740953974442348Salmonella enterica subsp. enterica serovar Typhimurium strATP-binding protein5e-47187
NC_011000:1262324:130457513045751305381807Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein6e-42171
NC_015381:1588742:160234716023471603153807Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein1e-41170
NC_007434:3973145:399854039985403999346807Burkholderia pseudomallei 1710b chromosome I, complete sequencehypothetical protein2e-41169
NC_011000:2732330:277862627786262779432807Burkholderia cenocepacia J2315 chromosome 1, complete sequencecosnerved hypothetical protein4e-41168
NC_009076:3564500:360521936052193606025807Burkholderia pseudomallei 1106a chromosome I, complete sequencehypothetical protein5e-40164
NC_007651:3064530:313762131376213138604984Burkholderia thailandensis E264 chromosome I, complete sequencehypothetical protein8e-40164
NC_011353:4688000:468806646880664688407342Escherichia coli O157:H7 str. EC4115 chromosome, complete genome4e-21102
NC_002655:4653160:465394546539454654286342Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded within prophage CP-933L4e-21102
NC_002695:4584177:458496245849624585303342Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein4e-21102
NC_010102:4745949:474832947483294748829501Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein7e-1477.8
NC_016831:4517850:452384745238474524347501Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein9e-1477.4
NC_011205:4718239:472403647240364724536501Salmonella enterica subsp. enterica serovar Dublin str. CT_020218539e-1477.4
NC_008609:1976403:203721520372152038015801Pelobacter propionicus DSM 2379, complete genomehypothetical protein2e-1273.2