Pre_GI: BLASTP Hits

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Query: NC_003198:3881221:3896099 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 3896099, End: 3896296, Length: 198

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016860:3964000:397577839757783975951174Salmonella enterica subsp. enterica serovar Typhimurium strISxac3 transposase4e-2199.8
NC_013716:2764550:277810327781032778342240Citrobacter rodentium ICC168, complete genome2e-1684.3
NC_014107:171170:193510193510193788279Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_A,ISEhe3 orfA5e-1682.8
NC_014121:3553809:356719235671923567470279Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein5e-1682.8
NC_009800:2049346:205289820528982053176279Escherichia coli HS, complete genomeISEhe3, transposase orfA9e-1682.4
NC_009800:1254409:126420212642021264480279Escherichia coli HS, complete genomeISEhe3, transposase orfA1e-1582
NC_009800:320115:328522328522328800279Escherichia coli HS, complete genomeISEhe3, transposase orfA1e-1582
NC_009800:289000:296704296704296982279Escherichia coli HS, complete genomeISEhe3, transposase orfA1e-1582
NC_009800:4529504:453716945371694537447279Escherichia coli HS, complete genomeISEhe3, transposase orfA1e-1582
NC_008258:4345400:436170243617024361980279Shigella flexneri 5 str. 8401, complete genomeISEhe3 orfA1e-1582
NC_009800:2788164:280215628021562802434279Escherichia coli HS, complete genomeISEhe3, transposase orfA1e-1582
NC_004741:2009769:201063820106382010916279Shigella flexneri 2a str. 2457T, complete genomeISEhe3 orfA1e-1582
NC_009800:349592:356879356879357157279Escherichia coli HS, complete genomeISEhe3, transposase orfA1e-1582
NC_014121:3627588:367247436724743672752279Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeISEhe3 orfA1e-1582
NC_012967:3769499:379277137927713793127357Escherichia coli B str. REL606 chromosome, complete genomeputative IS protein1e-1582
NC_012947:44512:513105131051666357Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completetransposase IS3/IS911 family protein1e-1582
NC_014121:2745097:275393727539372754215279Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeISEhe3 transposase A1e-1582
NC_014121:398012:409254409254409532279Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative transposase1e-1582
NC_014121:4299500:431807643180764318354279Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeISEhe3 orfA1e-1582
NC_004741:4364235:438213043821304382408279Shigella flexneri 2a str. 2457T, complete genomeISEhe3a orf1e-1582
NC_017328:4417000:443347344334734433757285Shigella flexneri 2002017 chromosome, complete genomeputative transposase ykgN1e-1581.6
NC_004337:4374500:439102843910284391312285Shigella flexneri 2a str. 301, complete genomehypothetical protein1e-1581.6
NC_004337:3590323:360688736068873607171285Shigella flexneri 2a str. 301, complete genomehypothetical protein1e-1581.6
NC_010067:3204682:321931132193113219622312Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-1581.3
NC_010694:63654:751507515075344195Erwinia tasmaniensis, complete genome4e-1579.7
NC_010473:247429:253352253352253690339Escherichia coli str. K-12 substr. DH10B, complete genomepredicted IS protein7e-1579.3
AC_000091:273325:279248279248279586339Escherichia coli W3110 DNA, complete genomepredicted IS protein7e-1579.3
NC_000913:272071:279248279248279586339Escherichia coli K12, complete genomepredicted IS protein7e-1579.3
NC_011205:645591:659191659191659409219Salmonella enterica subsp. enterica serovar Dublin str. CT_020218539e-1579
NC_011274:603901:612029612029612247219Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91transposase9e-1579
NC_011294:585500:593657593657593875219Salmonella enterica subsp. enterica serovar Enteritidis strtransposase9e-1579
NC_016831:2402893:241052324105232410741219Salmonella enterica subsp. enterica serovar Gallinarum/pullorumtransposase9e-1579
NC_006511:2251022:226015022601502260368219Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative transposase8e-1579
NC_011147:2247460:225533422553342255552219Salmonella enterica subsp. enterica serovar Paratyphi A str8e-1579
NC_016832:2363136:237152823715282371746219Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,transposase ykgN8e-1579
NC_004631:2366335:237472123747212374885165Salmonella enterica subsp. enterica serovar Typhi Ty2, complete2e-1478.2
NC_003198:598000:606216606216606380165Salmonella enterica subsp. enterica serovar Typhi str. CT18,2e-1478.2
NC_016863:606742:614892614892615110219Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative transposase3e-1477.4
NC_016860:644095:652246652246652464219Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein3e-1477.4
NC_011083:654479:662629662629662847219Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,3e-1477.4
NC_011149:588895:597045597045597263219Salmonella enterica subsp. enterica serovar Agona str. SL483,4e-1476.6
NC_013956:3273340:327993832799383280240303Pantoea ananatis LMG 20103 chromosome, complete genomeInsN15e-1476.3
NC_010102:2495441:250364225036422503860219Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein7e-1475.9
NC_008260:2340824:236922223692222369500279Alcanivorax borkumensis SK2, complete genometransposase, putative1e-1374.7
NC_007974:2048000:205643720564372056709273Ralstonia metallidurans CH34 chromosome 2, complete sequencetransposase IS3/IS9113e-1373.9
NC_010508:981377:991072991072991365294Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencetransposase IS3/IS911 family protein2e-1271.6
NC_010515:1375091:139734313973431397636294Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetransposase IS3/IS911 family protein2e-1271.6
NC_009434:3611738:367548236754823675760279Pseudomonas stutzeri A1501, complete genomeISxac3 transposase1e-1271.6
NC_010515:1678487:172306817230681723340273Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetransposase IS3/IS911 family protein2e-1271.2
NC_010508:1980689:198697119869711987243273Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencetransposase IS3/IS911 family protein2e-1270.9
NC_006512:1722138:174088117408811741159279Idiomarina loihiensis L2TR, complete genomeTransposon related ORF, HTH transcriptional regulator3e-1167.4
NC_016602:173314:197675197675197953279Vibrio furnissii NCTC 11218 chromosome 1, complete sequencetransposase A4e-1166.6
NC_009434:1580205:159740015974001597678279Pseudomonas stutzeri A1501, complete genometransposase family protein8e-1165.9
NC_009434:2006500:201143120114312011709279Pseudomonas stutzeri A1501, complete genometransposase family protein8e-1165.9
NC_013956:455000:463070463070463204135Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein7e-1165.9
NC_016816:4232680:424152342415234241657135Pantoea ananatis LMG 5342, complete genometransposase IS3/IS911 family protein7e-1165.9
NC_011992:3375929:339688433968843397162279Acidovorax ebreus TPSY, complete genometransposase IS3/IS911 family protein1e-1065.5
NC_015422:3513689:352843835284383528716279Alicycliphilus denitrificans K601 chromosome, complete genometransposase IS3/IS911 family protein1e-1065.5
NC_015733:715947:737677737677737955279Pseudomonas putida S16 chromosome, complete genomeIS3, transposase1e-1065.5
NC_015733:4130000:413654941365494136827279Pseudomonas putida S16 chromosome, complete genomeIS3, transposase1e-1065.5
NC_020829:5174354:518629651862965186574279Pseudomonas denitrificans ATCC 13867, complete genometransposase family protein1e-1065.1
NC_020829:3434736:344218834421883442466279Pseudomonas denitrificans ATCC 13867, complete genometransposase family protein1e-1065.1
NC_020829:1307736:132230613223061322584279Pseudomonas denitrificans ATCC 13867, complete genometransposase family protein1e-1065.1
NC_003295:1654000:166133816613381661625288Ralstonia solanacearum GMI1000, complete genomePUTATIVE TRANSPOSASE-RELATED PROTEIN2e-1064.7
NC_010322:6037566:605693060569306057208279Pseudomonas putida GB-1 chromosome, complete genometransposase IS3/IS911 family protein3e-1063.9
NC_010322:3315024:332515033251503325428279Pseudomonas putida GB-1 chromosome, complete genometransposase IS3/IS911 family protein3e-1063.9
NC_010322:1817598:182395218239521824230279Pseudomonas putida GB-1 chromosome, complete genometransposase IS3/IS911 family protein3e-1063.9
NC_003919:2435058:245768124576812457953273Xanthomonas axonopodis pv. citri str. 306, complete genomeISxac3 transposase6e-1062.8
NC_003919:169510:184281184281184553273Xanthomonas axonopodis pv. citri str. 306, complete genomeISxac3 transposase6e-1062.8
NC_003919:3812778:382891638289163829188273Xanthomonas axonopodis pv. citri str. 306, complete genomeISxac3 transposase6e-1062.8
NC_003919:103000:107220107220107492273Xanthomonas axonopodis pv. citri str. 306, complete genomeISxac3 transposase6e-1062.8
NC_003919:1203405:121111012111101211382273Xanthomonas axonopodis pv. citri str. 306, complete genomeISxac3 transposase6e-1062.8
NC_003919:4946884:495611149561114956383273Xanthomonas axonopodis pv. citri str. 306, complete genomeISxac3 transposase6e-1062.8
NC_003919:3060484:309674430967443097016273Xanthomonas axonopodis pv. citri str. 306, complete genomeISxac3 transposase6e-1062.8
NC_003919:1203405:122712712271271227399273Xanthomonas axonopodis pv. citri str. 306, complete genomeISxac3 transposase6e-1062.8
NC_003919:3113343:312051631205163120788273Xanthomonas axonopodis pv. citri str. 306, complete genomeISxac3 transposase6e-1062.8
NC_003919:2233000:224755222475522247824273Xanthomonas axonopodis pv. citri str. 306, complete genomeISxac3 transposase6e-1062.8
NC_015733:3736104:379330137933013793579279Pseudomonas putida S16 chromosome, complete genomeIS3, transposase6e-1062.8
NC_010688:2781624:281822228182222818500279Xanthomonas campestris pv. campestris, complete genomeISxac3 transposase8e-1062.4
NC_003902:1858349:190324019032401903518279Xanthomonas campestris pv. campestris str. ATCC 33913, completeISxac3 transposase8e-1062.4
NC_003902:3666544:368790636879063688184279Xanthomonas campestris pv. campestris str. ATCC 33913, completeISxac3 transposase8e-1062.4
NC_007086:4610819:462665646266564626934279Xanthomonas campestris pv. campestris str. 8004, complete genomeISxac3 transposase8e-1062.4
NC_003902:4430621:443987044398704440163294Xanthomonas campestris pv. campestris str. ATCC 33913, completeISxac3 transposase9e-1062.4
NC_007086:4489153:449745344974534497746294Xanthomonas campestris pv. campestris str. 8004, complete genomeISxac3 transposase9e-1062.4
NC_003902:4252000:426838042683804268658279Xanthomonas campestris pv. campestris str. ATCC 33913, completeISxac3 transposase8e-1062.4
NC_007498:1562270:157762515776251577903279Pelobacter carbinolicus DSM 2380, complete genometransposase and inactivated derivatives8e-1062.4
NC_010688:2781624:281713328171332817426294Xanthomonas campestris pv. campestris, complete genomeISXac3 transposase7e-1062.4
NC_007086:3118116:313629531362953136588294Xanthomonas campestris pv. campestris str. 8004, complete genomeISxac3 transposase7e-1062.4
NC_007086:1457531:147316914731691473462294Xanthomonas campestris pv. campestris str. 8004, complete genomeISxac3 transposase7e-1062.4
NC_003902:3430051:343733334373333437626294Xanthomonas campestris pv. campestris str. ATCC 33913, completeISxac3 transposase7e-1062.4
NC_007507:11000:283872838728680294Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183,ISxac3 transposase (fragment)7e-1062.4
NC_010688:3229820:325403232540323254325294Xanthomonas campestris pv. campestris, complete genomeISxac3 transposase7e-1062.4
NC_009832:2460027:246781124678112468089279Serratia proteamaculans 568, complete genometransposase IS3/IS911 family protein1e-0962
NC_009832:426993:435587435587435865279Serratia proteamaculans 568, complete genometransposase IS3/IS911 family protein1e-0962
NC_009832:2211154:222411122241112224389279Serratia proteamaculans 568, complete genometransposase IS3/IS911 family protein1e-0962
NC_009832:4564752:461527246152724615550279Serratia proteamaculans 568, complete genometransposase IS3/IS911 family protein1e-0962
NC_008321:2649781:266911526691152669333219Shewanella sp. MR-4, complete genometransposase IS3/IS911 family protein1e-0961.6
NC_010717:4787750:479370247937024793974273Xanthomonas oryzae pv. oryzae PXO99A, complete genomeISxac3 transposase2e-0960.8
NC_010717:4787750:480714348071434807415273Xanthomonas oryzae pv. oryzae PXO99A, complete genomeISxac3 transposase2e-0960.8
NC_013943:2857751:286691728669172867195279Denitrovibrio acetiphilus DSM 12809 chromosome, complete genometransposase IS3/IS911 family protein2e-0960.8
NC_016002:2453919:246103424610342461312279Pseudogulbenkiania sp. NH8B, complete genometransposase IS3/IS911 family protein2e-0960.8
NC_017506:1100679:112777111277711128055285Marinobacter adhaerens HP15 chromosome, complete genometransposase IS3/IS9113e-0960.5
NC_009512:469000:481598481598481834237Pseudomonas putida F1, complete genometransposase IS3/IS911 family protein3e-0960.5
NC_010694:2971170:299501429950142995292279Erwinia tasmaniensis, complete genometransposase (IS3 family, orf A), similar to ISPsy263e-0960.5
NC_016002:1048420:105358210535821054061480Pseudogulbenkiania sp. NH8B, complete genometransposase IS3/IS911 family protein5e-0960.1
NC_009348:2247500:226424622642462264539294Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS3 family transposase4e-0960.1
NC_009348:47974:691546915469447294Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS3 family transposase4e-0960.1
NC_009348:2247500:225998422599842260277294Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS3 family transposase4e-0960.1
NC_009348:381752:387051387051387344294Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS3 family transposase4e-0960.1
NC_009348:1475955:151831515183151518608294Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS3 family transposase4e-0960.1
NC_009348:2247500:225331822533182253611294Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS3 family transposase4e-0960.1
NC_009350:137645:144043144043144336294Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, completeIS3 family transposase4e-0960.1
NC_017033:1939507:195436819543681954643276Frateuria aurantia DSM 6220 chromosome, complete genometransposase6e-0959.3
NC_008782:1917634:192720719272071927485279Acidovorax sp. JS42, complete genometransposase IS3/IS911 family protein9e-0958.9
NC_009348:3029963:303563730356373035930294Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS3 family transposase2e-0857.8
NC_008577:2818546:283775628377562838001246Shewanella sp. ANA-3 chromosome 1, complete sequencetransposase IS3/IS911 family protein3e-0857.4
NC_014563:19307:258532585326089237Pantoea vagans C9-1 plasmid pPag2, complete sequencehypothetical protein6e-0856.2
NC_013508:1491945:149686614968661497150285Edwardsiella tarda EIB202, complete genometransposase7e-0856.2
NC_013716:5141269:514761551476155147899285Citrobacter rodentium ICC168, complete genomeISEc14 transposase A7e-0855.8
NC_013716:1756545:176570817657081765992285Citrobacter rodentium ICC168, complete genomeISEc14 transposase A7e-0855.8
NC_013716:3512950:355841835584183558702285Citrobacter rodentium ICC168, complete genomeISEc14 transposase A7e-0855.8
NC_013716:2764550:277603027760302776314285Citrobacter rodentium ICC168, complete genomeISEc14 transposase A7e-0855.8
NC_013716:3109700:314352331435233143807285Citrobacter rodentium ICC168, complete genomeISEc14 transposase A7e-0855.8
NC_010943:2422838:244752624475262447837312Stenotrophomonas maltophilia K279a, complete genomeputative ISXac3 like transposase for insertion sequence element9e-0855.5
NC_012214:1355500:137554813755481375832285Erwinia pyrifoliae Ep1/96, complete genomehypothetical protein1e-0755.5
NC_014500:1862000:190476419047641905048285Dickeya dadantii 3937 chromosome, complete genomeISEch10 OrfA1e-0755.1
NC_012968:1594954:160267616026761602942267Methylotenera mobilis JLW8, complete genome2e-0754.7
NC_012968:2000218:201262520126252012906282Methylotenera mobilis JLW8, complete genometransposase IS3/IS911 family protein2e-0754.7
NC_012779:2586175:259443725944372594787351Edwardsiella ictaluri 93-146, complete genomehypothetical protein2e-0754.7
NC_002516:1031386:106513810651381065425288Pseudomonas aeruginosa PAO1, complete genomehypothetical protein2e-0754.7
NC_010943:493002:503880503880504152273Stenotrophomonas maltophilia K279a, complete genomeputative ISXac3 like transposase3e-0753.9
NC_010943:2499092:252075025207502521022273Stenotrophomonas maltophilia K279a, complete genomeputative ISXac3 like transposase family protein3e-0753.9
NC_010943:1884695:189644618964461896718273Stenotrophomonas maltophilia K279a, complete genomeputative ISXac3 like transposase3e-0753.9
NC_012969:1574330:157919615791961579477282Methylovorus glucosetrophus SIP3-4 chromosome, complete genometransposase IS3/IS911 family protein3e-0753.9
NC_013722:2150882:217388621738862174140255Xanthomonas albilineans, complete genomeputative isxac3 transposase orfa (fragment) protein8e-0752.4
NC_012912:3853377:385943238594323859716285Dickeya zeae Ech1591, complete genometransposase IS3/IS911 family protein8e-0752.4