Pre_GI: BLASTP Hits

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Query: NC_003198:3881221:3889835 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 3889835, End: 3890691, Length: 857

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:3905875:391949739194973920354858Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative transcriptional regulator6e-85313
NC_012125:3879917:389149138914913892279789Salmonella enterica subsp. enterica serovar Paratyphi C straintranscriptional regulator2e-69262
NC_011149:3863913:388269238826923883456765Salmonella enterica subsp. enterica serovar Agona str. SL483,transcriptional regulatory protein, C2e-64245
NC_016860:3964000:398109439810943981858765Salmonella enterica subsp. enterica serovar Typhimurium strtranscriptional regulator C8e-64243
NC_009801:3175714:318519531851953186004810Escherichia coli E24377A, complete genometranscriptional regulatory protein, C terminal1e-33143
CU928160:3030324:303980530398053040614810Escherichia coli IAI1 chromosome, complete genomeputative transcriptional regulator1e-33143
NC_011751:3285646:329512932951293295938810Escherichia coli UMN026 chromosome, complete genomeputative transcriptional regulator1e-33143
NC_011750:3407500:341703634170363417845810Escherichia coli IAI39 chromosome, complete genomeputative transcriptional regulator1e-33143
NC_011415:3217796:322727732272773228086810Escherichia coli SE11 chromosome, complete genomeputative transcriptional regulator1e-33143
NC_012759:2862807:287367228736722874481810Escherichia coli BW2952 chromosome, complete genomeputative transcriptional regulator1e-33143
NC_000913:2975659:298652429865242987333810Escherichia coli K12, complete genomepredicted transcriptional regulator1e-33143
NC_010473:3069529:308039430803943081203810Escherichia coli str. K-12 substr. DH10B, complete genomepredicted transcriptional regulator1e-33143
AC_000091:2976293:298715829871582987967810Escherichia coli W3110 DNA, complete genomepredicted transcriptional regulator1e-33143
NC_002655:3769643:377820237782023779011810Escherichia coli O157:H7 EDL933, complete genomeputative sensory transducer1e-33143
NC_009648:293052:307297307297308121825Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative sensory transducer1e-33143
CP002185:3167738:317860331786033179412810Escherichia coli W, complete genomepredicted transcriptional regulator1e-33143
CP002516:903241:926665926665927474810Escherichia coli KO11, complete genometranscriptional regulator, CadC1e-33143
NC_011741:3030324:303980530398053040614810Escherichia coli IAI1 chromosome, complete genomeputative transcriptional regulator1e-33143
NC_010468:906957:931392931392932201810Escherichia coli ATCC 8739, complete genometranscriptional regulator, CadC1e-33143
NC_009800:2995958:300682330068233007632810Escherichia coli HS, complete genometranscriptional regulatory protein, C terminal1e-33143
NC_011748:3196173:320565432056543206463810Escherichia coli 55989, complete genomeputative transcriptional regulator1e-33143
CU928145:3196173:320565432056543206463810Escherichia coli 55989 chromosome, complete genomeputative transcriptional regulator1e-33143
NC_013941:3540420:354897935489793549788810Escherichia coli O55:H7 str. CB9615 chromosome, complete genomesensory transducer1e-33143
NC_013008:3761467:377002637700263770835810Escherichia coli O157:H7 str. TW14359 chromosome, complete genometranscriptional regulator1e-33143
NC_011353:3805819:381530038153003816109810Escherichia coli O157:H7 str. EC4115 chromosome, complete genometranscriptional regulator1e-33143
NC_002695:3702344:371090337109033711712810Escherichia coli O157:H7 str. Sakai, complete genomeputative sensory transducer1e-33143
NC_016902:903241:926665926665927474810Escherichia coli KO11FL chromosome, complete genometranscriptional regulator CadC1e-33143
NC_013364:3552284:356177135617713562580810Escherichia coli O111:H- str. 11128, complete genomeputative transcriptional regulator1e-33143
NC_013361:3867558:387703938770393877848810Escherichia coli O26:H11 str. 11368 chromosome, complete genometranscriptional regulator1e-33143
NC_013353:3474077:348355834835583484367810Escherichia coli O103:H2 str. 12009, complete genometranscriptional regulator2e-33142
AP010958:3474077:348355834835583484367810Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted transcriptional regulator2e-33142
NC_007384:3151344:3160819316081931624041586Shigella sonnei Ss046, complete genome8e-31134
NC_014618:2989000:299825829982582999097840Enterobacter cloacae SCF1 chromosome, complete genometranscriptional regulator CadC3e-28125
NC_013941:1314158:132417513241751324987813Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein1e-21103
NC_013008:1271621:128205512820551282867813Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein1e-21103
NC_011353:1271335:128176912817691282581813Escherichia coli O157:H7 str. EC4115 chromosome, complete genometranscriptional regulator1e-21103
NC_002655:1413244:142326314232631424075813Escherichia coli O157:H7 EDL933, complete genomehypothetical protein1e-21103
NC_002695:1329472:133949113394911340303813Escherichia coli O157:H7 str. Sakai, complete genomeputative transcriptional regulator1e-21103
NC_009648:4958500:497541949754194976093675Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative transcriptional regulatory protein6e-1685.1
NC_012731:403670:420529420529421224696Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative transcriptional regulatory protein5e-1685.1
NC_016845:411844:429083429083429727645Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein5e-1685.1
NC_013850:4993307:499819349981934998837645Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, CadC1e-1584
NC_016612:1840325:185718718571871857753567Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputative transcriptional regulatory protein1e-1480.9
NC_014618:1700784:170658417065841707351768Enterobacter cloacae SCF1 chromosome, complete genometranscriptional regulator CadC4e-1479
NC_021066:3769405:377676637767663777620855Raoultella ornithinolytica B6, complete genometranscriptional regulator6e-1375.1
NC_015663:1934863:194734419473441947895552Enterobacter aerogenes KCTC 2190 chromosome, complete genomeCadC family transcriptional regulator2e-1273.2
NC_020181:3518396:352330035233003523851552Enterobacter aerogenes EA1509E, complete genomeputative transcriptional regulatory protein2e-1273.2
NC_016816:2508204:251985925198592520752894Pantoea ananatis LMG 5342, complete genomeputative transcriptional regulator9e-1270.9
NC_013956:1994970:200213620021362003050915Pantoea ananatis LMG 20103 chromosome, complete genomeYqeI9e-1270.9
NC_010694:436500:453335453335454240906Erwinia tasmaniensis, complete genomePutative transcriptional regulator2e-1169.7
NC_014306:1981956:198744719874471988298852Erwinia billingiae Eb661, complete genomeTranscriptional regulatory protein2e-1067
NC_015663:5253242:526920552692055269951747Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein3e-0962.4
NC_020063:3690308:372029837202983721065768Enterobacteriaceae bacterium strain FGI 57, complete genomeDNA-binding protein with winged-HTH domain1e-0860.8
NC_009832:5214850:522198652219865222753768Serratia proteamaculans 568, complete genometranscriptional regulator, CadC3e-0859.3
NC_013508:3188978:320403432040343204789756Edwardsiella tarda EIB202, complete genomehypothetical protein1e-0757.4
NC_015566:5197624:520388652038865204656771Serratia sp. AS12 chromosome, complete genometranscriptional regulator CadC2e-0757
NC_008258:3550500:356146835614683562232765Shigella flexneri 5 str. 8401, complete genomehypothetical protein2e-0756.6
NC_020211:103371:114278114278115075798Serratia marcescens WW4, complete genomehypothetical protein2e-0756.2
NC_015968:3023048:303106230310623031793732Enterobacter asburiae LF7a chromosome, complete genometranscriptional regulator, CadC2e-0756.2
NC_014121:3453815:346184634618463462583738Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein4e-0755.8
NC_021066:4906239:492072549207254921480756Raoultella ornithinolytica B6, complete genomeDNA-binding protein with winged-HTH domain4e-0755.5
NC_004337:3590323:360105736010573601821765Shigella flexneri 2a str. 301, complete genomehypothetical protein5e-0755.1
NC_004741:4160500:417218241721824172946765Shigella flexneri 2a str. 2457T, complete genomehypothetical protein5e-0755.1
NC_017328:3625000:363577336357733636537765Shigella flexneri 2002017 chromosome, complete genomeTranscriptional regulator, CadC5e-0755.1