Pre_GI: BLASTP Hits

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Query: NC_003198:3881221:3882205 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 3882205, End: 3883107, Length: 903

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:3905875:392699139269913927893903Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative permease9e-152536
NC_012125:3879917:389889038988903899837948Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein1e-151535
NC_010498:4072681:409460640946064095529924Escherichia coli SMS-3-5, complete genomecarboxylate/amino acid/amine transporter3e-136484
NC_016902:44744:447444474445667924Escherichia coli KO11FL chromosome, complete genomecarboxylate/amino acid/amine transporter5e-136483
NC_012947:44512:453344533446257924Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completecarboxylate/amino acid/amine transporter5e-136483
NC_011750:4390000:441705344170534417976924Escherichia coli IAI39 chromosome, complete genomehypothetical protein5e-136483
CP002185:4035502:406040640604064061329924Escherichia coli W, complete genomepredicted inner membrane protein5e-136483
CP002516:44744:447444474445667924Escherichia coli KO11, complete genomecarboxylate/amino acid/amine transporter5e-136483
NC_011601:4096427:413835441383544139277924Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein1e-135482
NC_011751:4293966:429883242988324299755924Escherichia coli UMN026 chromosome, complete genomehypothetical protein1e-135482
NC_002655:4653160:469356546935654694488924Escherichia coli O157:H7 EDL933, complete genomeputative permease transporter6e-135480
NC_002695:4584177:462458246245824625505924Escherichia coli O157:H7 str. Sakai, complete genomeputative permease transporter6e-135480
NC_011353:4688000:472768647276864728609924Escherichia coli O157:H7 str. EC4115 chromosome, complete genomecarboxylate/amino acid/amine transporter6e-135480
NC_013008:4643825:468372746837274684650924Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeinner membrane protein6e-135480
NC_013941:4470932:451207545120754512998924Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeYicL6e-135480
NC_013716:4306695:434917643491764350078903Citrobacter rodentium ICC168, complete genomehypothetical protein3e-134478
NC_009792:4693152:469884646988464699727882Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein5e-133473
NC_013508:1289159:129113912911391292071933Edwardsiella tarda EIB202, complete genomecarboxylate/amino acid/amine transporter1e-99362
NC_012779:1286500:1286928128692812882321305Edwardsiella ictaluri 93-146, complete genomehypothetical protein1e-97356
UCMB5137:3660165:368758336875833688503921Bacillus atrophaeus UCMB-5137hypothetical protein4e-48191
NC_020272:20435:459414594146798858Bacillus amyloliquefaciens IT-45, complete genomeputative transporter yyaM1e-47190
NC_014328:711842:723676723676724590915Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative permease5e-40164
NC_014019:3213599:321505832150583215978921Bacillus megaterium QM B1551 chromosome, complete genomeintegral membrane protein (DUF6)2e-35149
NC_014103:3212839:321429832142983215218921Bacillus megaterium DSM319 chromosome, complete genomehypothetical protein2e-35149
NC_014727:2010000:201035120103512011262912Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,permease of the drug/metabolite transporter (dmt) superfamily1e-33143
NC_020244:516993:5406915406915417071017Bacillus subtilis XF-1, complete genomeputative permease1e-32140
NC_014976:2735423:275201227520122752971960Bacillus subtilis BSn5 chromosome, complete genomeputative permease1e-32140
NC_019896:3491000:349572034957203496679960Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completetransport protein YdeD2e-32139
NC_017195:517344:539416539416540375960Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completetransporter, EamA family8e-32137
NC_016884:2759226:277518627751862776142957Sulfobacillus acidophilus DSM 10332 chromosome, complete genomehypothetical protein3e-26119
NC_015738:1768951:1800810180081018024201611Eggerthella sp. YY7918, complete genomehypothetical protein7e-26117
NC_015978:1266196:128984512898451290738894Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completehypothetical protein5e-25115
NC_015738:1768951:1802540180254018040541515Eggerthella sp. YY7918, complete genomedrug/metabolite transporter superfamily permease2e-23109
NC_014644:1456689:147997214799721480919948Gardnerella vaginalis ATCC 14019 chromosome, complete genomeDMT superfamily drug/metabolite transporter8e-22104
NC_016641:2735054:274591127459112746603693Paenibacillus terrae HPL-003 chromosome, complete genometransporter yded5e-21101
NC_002939:579087:602546602546603472927Geobacter sulfurreducens PCA, complete genomehypothetical protein5e-1065.5
NC_014153:2125551:213009021300902131049960Thiomonas intermedia K12 chromosome, complete genomeprotein of unknown function DUF6 transmembrane2e-0963.2
NC_016584:593954:599018599018599914897Desulfosporosinus orientis DSM 765 chromosome, complete genomeDMT(drug/metabolite transporter) superfamily permease3e-0755.8
NC_014844:2028666:204813120481312049021891Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomehypothetical protein1e-0653.9