Pre_GI: BLASTP Hits

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Query: NC_003198:331314:339338 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 339338, End: 339781, Length: 444

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:2612809:263823226382322638363132Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein4e-1890.1
NC_012491:1293086:130863613086361309079444Brevibacillus brevis NBRC 100599, complete genomehypothetical protein1e-1168.6
NC_010002:4930865:493730749373074937735429Delftia acidovorans SPH-1, complete genomehypothetical protein2e-1167.8
NC_018681:1021063:103000810300081030451444Nocardia brasiliensis ATCC 700358 chromosome, complete genomehypothetical protein3e-0754.3
NC_009953:1484000:149190314919031492349447Salinispora arenicola CNS-205 chromosome, complete genomehypothetical protein2e-0651.2
NC_016887:1035458:105372810537281054210483Nocardia cyriacigeorgica GUH-2, complete genomehypothetical protein2e-0651.2