Pre_GI: BLASTP Hits

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Query: NC_003198:3126548:3146822 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 3146822, End: 3147307, Length: 486

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:3100683:312095731209573121442486Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-91334
NC_004631:3112043:313231731323173132802486Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein1e-91334
NC_011147:3075186:309547230954723095957486Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein1e-89328
NC_006511:3079512:309979830997983100283486Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein1e-89328
NC_011149:3187022:320725532072553207740486Salmonella enterica subsp. enterica serovar Agona str. SL483,putative cytoplasmic protein5e-89326
NC_012125:4716000:474863547486354749081447Salmonella enterica subsp. enterica serovar Paratyphi C straincytoplasmic protein3e-33140
NC_011147:4460726:450007645000764500606531Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein3e-33140
NC_015761:4355335:437685843768584377388531Salmonella bongori NCTC 12419, complete genomehypothetical protein4e-28123
NC_008314:2744553:274678927467892747313525Ralstonia eutropha H16 chromosome 2, complete sequencehypothetical protein4e-23107
NC_005773:176885:189206189206189700495Pseudomonas syringae pv. phaseolicola 1448A, complete genomeSciM protein2e-1581.6
NC_005773:5636606:565694656569465657446501Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein2e-1581.3
NC_007005:98488:112987112987113487501Pseudomonas syringae pv. syringae B728a, complete genomeProtein of unknown function DUF7962e-1581.3
NC_007005:2191500:220806222080622208556495Pseudomonas syringae pv. syringae B728a, complete genomeProtein of unknown function DUF7961e-1375.1
NC_009937:311242:319793319793320269477Azorhizobium caulinodans ORS 571, complete genomeprotein of unknown function7e-1269.7
NC_007645:4423507:443826944382694438757489Hahella chejuensis KCTC 2396, complete genomeHemolysin-coregulated protein (uncharacterized)1e-1168.6
NC_014310:785220:807927807927808430504Ralstonia solanacearum PSI07 megaplasmid, complete sequencesecretion system protein (evpc-like), hemolysin-coregulated protein2e-1168.6
NC_014323:4619344:463245546324554632946492Herbaspirillum seropedicae SmR1 chromosome, complete genomehypothetical protein3e-1167.8
NC_010086:871723:876594876594877079486Burkholderia multivorans ATCC 17616 chromosome 2, completetype VI secretion system effector, Hcp1 family3e-1167.8
NC_010805:1576735:159822515982251598710486Burkholderia multivorans ATCC 17616 chromosome 2, completehypothetical protein3e-1167.8
NC_007511:1094050:109892210989221099407486Burkholderia sp. 383 chromosome 2, complete sequenceprotein of unknown function DUF7965e-1167
NC_005773:5636606:565081656508165651310495Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein6e-1166.6
NC_009074:3559211:355975135597513560254504Burkholderia pseudomallei 668 chromosome I, complete sequencehypothetical protein4e-1063.9
NC_006350:3710641:371064137106413711144504Burkholderia pseudomallei K96243 chromosome 1, complete sequencehypothetical protein4e-1063.9
NC_008313:691692:696651696651697136486Ralstonia eutropha H16 chromosome 1, complete sequenceHemolysin-coregulated protein5e-1063.5
NC_015381:429940:452091452091452594504Burkholderia gladioli BSR3 chromosome 1, complete sequenceputative hemolysin-coregulated protein4e-0960.5
NC_007510:409843:426923426923427426504Burkholderia sp. 383 chromosome 1, complete sequenceprotein of unknown function DUF7967e-0959.7
NC_008390:407315:427925427925428428504Burkholderia cepacia AMMD chromosome 1, complete sequenceprotein of unknown function DUF7967e-0959.7
NC_005773:2177184:218518421851842185672489Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein7e-0959.7
NC_018868:973379:992648992648993136489Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomehemolysin-coregulated protein2e-0858.5
NC_020064:3998715:403600740360074036489483Serratia marcescens FGI94, complete genomehemolysin-coregulated protein (uncharacterized)2e-0858.5
NC_008391:271254:276142276142276627486Burkholderia cepacia AMMD chromosome 2, complete sequenceprotein of unknown function DUF7963e-0857.8
NC_013282:1256769:127677812767781277263486Cronobacter turicensis, complete genomeProtein hcp16e-0856.6
NC_012997:1689583:168958316895831690065483Teredinibacter turnerae T7901, complete genometype VI secretion system effector, Hcp1 family1e-0755.8
NC_014355:1865003:189197418919741892429456Candidatus Nitrospira defluvii, complete genomehypothetical protein2e-0755.1
NC_016835:128757:136918136918137409492Rahnella aquatilis CIP 78.65 = ATCC 33071 plasmid pRahaq201,type VI secretion system effector6e-0753.5
NC_014306:3006028:303106230310623031544483Erwinia billingiae Eb661, complete genomePutative Type VI secretion system effector8e-0753.1
NC_020064:2921809:293063129306312931113483Serratia marcescens FGI94, complete genometype VI secretion system effector, Hcp1 family2e-0651.2
NC_002947:5961096:597220559722055972693489Pseudomonas putida KT2440, complete genomehypothetical protein4e-0650.8
NC_020211:4484817:449146244914624491944483Serratia marcescens WW4, complete genometype VI secretion system effector4e-0650.4
NC_007005:4810295:482554248255424826030489Pseudomonas syringae pv. syringae B728a, complete genomeProtein of unknown function DUF7964e-0650.4