Pre_GI: BLASTP Hits

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Query: NC_003198:3126548:3142971 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 3142971, End: 3143237, Length: 267

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:3075186:309162030916203091994375Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein5e-37152
NC_011149:3187022:320340432034043203778375Salmonella enterica subsp. enterica serovar Agona str. SL483,putative cytoplasmic protein5e-37152
NC_006511:3079512:309594630959463096212267Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein1e-36151
NC_016832:3100683:311710631171063117372267Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-36151
NC_004631:3112043:312846631284663128732267Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein1e-36151