Pre_GI: BLASTP Hits

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Query: NC_003198:3126548:3140728 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 3140728, End: 3141252, Length: 525

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011149:3187022:320116132011613201718558Salmonella enterica subsp. enterica serovar Agona str. SL483,putative cytoplasmic protein3e-100363
NC_011147:3075186:308937730893773089901525Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein5e-98356
NC_006511:3079512:309370330937033094227525Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein5e-98356
NC_016832:3100683:311486331148633115420558Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-100364
NC_004631:3112043:312622331262233126747525Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein1e-100364