Pre_GI: BLASTP Hits

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Query: NC_003198:3126548:3138956 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 3138956, End: 3139162, Length: 207

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:3100683:311309131130913113297207Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein5e-23106
NC_011147:3075186:308760530876053087811207Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein5e-23106
NC_006511:3079512:309193130919313092137207Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCpossible membrane protein5e-23106
NC_004631:3112043:312445131244513124657207Salmonella enterica subsp. enterica serovar Typhi Ty2, completepossible membrane protein5e-23106
NC_011149:3187022:319920931992093199595387Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein3e-22103