Pre_GI: BLASTP Hits

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Query: NC_003198:3126548:3137880 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 3137880, End: 3138506, Length: 627

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:3075186:308652930865293087155627Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-118424
NC_006511:3079512:309085530908553091481627Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein2e-118424
NC_004631:3112043:312337531233753124001627Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-118424
NC_016832:3100683:311213531121353112641507Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein6e-95346
NC_011149:3187022:319843331984333198939507Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein1e-93342
NC_003143:1630000:167401816740181674488471Yersinia pestis CO92, complete genomehypothetical protein2e-21102
NC_008150:844727:887882887882888352471Yersinia pestis Antiqua, complete genomehypothetical protein2e-21102
NC_005810:1467772:150292315029231503393471Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein2e-21102
NC_008149:2802392:280920828092082809678471Yersinia pestis Nepal516, complete genomehypothetical protein2e-21102
NC_004088:2966331:297314729731472973617471Yersinia pestis KIM, complete genomehypothetical protein2e-21102
NC_017168:3977767:398458339845833985053471Yersinia pestis A1122 chromosome, complete genomehypothetical protein2e-21102
NC_017265:2586729:259354525935452594015471Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein2e-21102
NC_013956:4579759:458576845857684586472705Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein2e-1995.9