Pre_GI: BLASTP Hits

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Query: NC_003198:3126548:3136204 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 3136204, End: 3136707, Length: 504

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:3075186:308485330848533085356504Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein1e-86317
NC_006511:3079512:308917930891793089682504Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein1e-86317
NC_004631:3112043:312169931216993122202504Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein1e-86317
NC_010634:1755548:179491217949121795424513Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein2e-31134
NC_016832:3100683:311067231106723110842171Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein6e-1993.2
NC_011149:3187022:319697031969703197140171Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein6e-1993.2