Pre_GI: BLASTP Hits

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Query: NC_003198:3126548:3135344 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 3135344, End: 3135505, Length: 162

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:3075186:308399330839933084154162Salmonella enterica subsp. enterica serovar Paratyphi A str9e-25112
NC_004631:3112043:312083931208393121000162Salmonella enterica subsp. enterica serovar Typhi Ty2, complete9e-25112
NC_017187:906877:9103839103839185908208Arcobacter butzleri ED-1, complete genomeadhesin/hemagglutinin1e-1065.5
NC_007005:5500196:5513236551323655151671932Pseudomonas syringae pv. syringae B728a, complete genomeS-type Pyocin2e-0858.2
NC_015663:4767443:4777638477763847797162079Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative klebicin D activity protein5e-0856.2
NC_007005:321695:3297343297343317041971Pseudomonas syringae pv. syringae B728a, complete genomeHNH endonuclease:S-type Pyocin2e-0754.7
NC_015968:511282:5302275302275318851659Enterobacter asburiae LF7a chromosome, complete genomeS-type Pyocin domain-containing protein4e-0753.5
NC_010693:1:3129312950511923Erwinia tasmaniensis plasmid pET46, complete sequencePutative klebicin D activity protein5e-0753.1
NC_016818:3851542:3874857387485738772772421Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completehypothetical protein7e-0752.8