Pre_GI: BLASTP Hits

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Query: NC_003198:3126548:3133828 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 3133828, End: 3133947, Length: 120

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:3100683:310796331079633108082120Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein7e-1682.8
NC_011147:3075186:308247730824773082596120Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein7e-1682.8
NC_006511:3079512:308680330868033086922120Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein7e-1682.8
NC_004631:3112043:311932331193233119442120Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein7e-1682.8
NC_011149:3187022:319431431943143194433120Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein2e-1477.8