Pre_GI: BLASTP Hits

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Query: NC_003198:3126548:3133460 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 3133460, End: 3133600, Length: 141

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:3075186:308210930821093082249141Salmonella enterica subsp. enterica serovar Paratyphi A str7e-2095.9
NC_011149:3187022:319388631938863194086201Salmonella enterica subsp. enterica serovar Agona str. SL483,hcp1e-1995.1
NC_009792:4017510:403007840300784030329252Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein8e-1889
NC_016832:3100683:310737031073703107714345Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hcp2e-1787.4
NC_011149:1110642:111395011139501114468519Salmonella enterica subsp. enterica serovar Agona str. SL483,hcp3e-1683.6
NC_011274:1129686:113485311348531135371519Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein3e-1683.6
NC_002695:261235:264133264133264651519Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein3e-1683.6
CU928160:256932:259913259913260431519Escherichia coli IAI1 chromosome, complete genomeConserved hypothetical protein Aec16 (Hcp-like)3e-1683.6
NC_002655:261236:264134264134264652519Escherichia coli O157:H7 EDL933, complete genomehypothetical protein3e-1683.6
NC_011353:261220:264118264118264636519Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein3e-1683.6
NC_011741:256932:259913259913260431519Escherichia coli IAI1 chromosome, complete genomehypothetical protein3e-1683.6
NC_013008:261226:264124264124264642519Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein3e-1683.6
NC_013941:261094:264076264076264594519Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeHcp3e-1683.6
NC_016822:267758:273014273014273532519Shigella sonnei 53G, complete genomehemolysin co-regulated protein3e-1683.6
NC_008563:258725:263718263718264236519Escherichia coli APEC O1, complete genomehypothetical protein2e-1580.9
NC_008253:257059:263065263065263583519Escherichia coli 536, complete genomehypothetical hemolysin co-regulated protein2e-1580.9
NC_007946:258747:263740263740264258519Escherichia coli UTI89, complete genomehypothetical protein2e-1580.9
NC_011751:256830:261820261820262338519Escherichia coli UMN026 chromosome, complete genomehypothetical protein2e-1580.9
NC_011742:258746:263739263739264257519Escherichia coli S88 chromosome, complete genomehypothetical protein2e-1580.9
NC_011745:258727:263724263724264242519Escherichia coli ED1a chromosome, complete genomehypothetical protein5e-1579.7
NC_015968:4117835:412532441253244125842519Enterobacter asburiae LF7a chromosome, complete genomeHcp1 family type VI secretion system effector2e-1477.8
NC_008570:1986466:199051519905151991033519Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehemolysin co-regulated protein7e-1475.9
NC_012912:2901021:291846629184662918984519Dickeya zeae Ech1591, complete genometype VI secretion system effector, Hcp1 family2e-1374.3
NC_012912:1701231:171793717179371718455519Dickeya zeae Ech1591, complete genometype VI secretion system effector, Hcp1 family2e-1374.3
NC_014500:3097362:313812731381273138645519Dickeya dadantii 3937 chromosome, complete genomeHcp2e-1374.3
NC_014500:894136:914093914093914611519Dickeya dadantii 3937 chromosome, complete genomeHcp2e-1374.3
NC_013421:57961:652456524565763519Pectobacterium wasabiae WPP163, complete genometype VI secretion system effector, Hcp1 family6e-1372.8
NC_013421:553193:570784570784571158375Pectobacterium wasabiae WPP163, complete genometype VI secretion system effector, Hcp1 family6e-1372.8
NC_016445:984856:986816986816987145330Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehcp protein8e-1269.3
NC_002505:1507860:150963215096321510150519Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehcp protein7e-1269.3
NC_009457:1068000:106810110681011068619519Vibrio cholerae O395 chromosome 2, complete sequencehcp protein7e-1269.3
NC_012578:1465302:146707414670741467592519Vibrio cholerae M66-2 chromosome I, complete sequencehcp protein7e-1269.3
NC_012668:2115228:213392121339212134439519Vibrio cholerae MJ-1236 chromosome 1, complete sequenceHcp protein7e-1269.3
NC_016944:1504888:150666015066601507178519Vibrio cholerae IEC224 chromosome I, complete sequencehcp protein7e-1269.3
NC_014532:3596097:360886636088663609384519Halomonas elongata DSM 2581, complete genomeK068871e-1168.2
NC_016602:2037162:205442320544232054941519Vibrio furnissii NCTC 11218 chromosome 1, complete sequencehcp protein3e-1167
NC_015559:2745570:275060527506052751123519Marinomonas posidonica IVIA-Po-181 chromosome, complete genometype VI secretion system effector, Hcp1 family2e-1064.3
NC_016642:1234500:124842712484271248942516Pseudovibrio sp. FO-BEG1 chromosome, complete genometype VI secretion system effector4e-1063.5
NC_010505:1205747:121487812148781215393516Methylobacterium radiotolerans JCM 2831, complete genometype VI secretion system effector, Hcp1 family1e-0962
NC_009439:4913767:491983749198374920355519Pseudomonas mendocina ymp, complete genomehypothetical protein8e-0855.8
NC_020829:1307736:132614213261421326660519Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein8e-0855.8
NC_007492:2310793:233099623309962331511516Pseudomonas fluorescens PfO-1, complete genomeProtein of unknown function DUF7964e-0753.5
NC_008027:896000:896182896182896700519Pseudomonas entomophila L48, complete genomehemolysin co-regulated protein 1A9e-0752.4
NC_008027:558507:558507558507559025519Pseudomonas entomophila L48, complete genomehemolysin co-regulated protein 1B9e-0752.4
NC_008027:4889662:491355949135594914077519Pseudomonas entomophila L48, complete genomehemolysin co-regulated protein 1C9e-0752.4
NC_008027:5576458:559406755940675594585519Pseudomonas entomophila L48, complete genomehemolysin co-regulated protein 1A1e-0652
NC_008027:3844355:387980238798023880302501Pseudomonas entomophila L48, complete genomehemolysin co-regulated protein 2A1e-0652
NC_002947:4604582:461052046105204611035516Pseudomonas putida KT2440, complete genomehcp protein2e-0651.6
NC_008463:282565:288454288454288972519Pseudomonas aeruginosa UCBPP-PA14, complete genomeSecreted protein Hcp3e-0650.8
NC_009802:114749:147250147250147771522Campylobacter concisus 13826, complete genomesecreted protein Hcp3e-0650.4