Pre_GI: BLASTP Hits

Some Help

Query: NC_003198:3126548:3131717 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 3131717, End: 3132424, Length: 708

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:3100683:310585231058523106559708Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-120432
NC_011147:3075186:308036630803663081073708Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein1e-120432
NC_006511:3079512:308469230846923085399708Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein1e-120432
NC_004631:3112043:311721231172123117919708Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein1e-120432
NC_011149:3187022:319220331922033192910708Salmonella enterica subsp. enterica serovar Agona str. SL483,YqgA1e-120432
NC_010067:4418000:443822444382244438931708Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-116417
NC_013716:5201097:527189352718935272600708Citrobacter rodentium ICC168, complete genomehypothetical protein2e-97355
NC_016845:4498097:450195245019524502665714Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative transport protein3e-95347
NC_009792:4017510:402269940226994023406708Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein5e-95347
NC_008253:3122148:312727131272713127978708Escherichia coli 536, complete genomeputative membrane protein YqgA7e-92336
NC_009648:3720000:372022937202293720909681Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative transport protein4e-90330
NC_013364:3701895:370442837044283705135708Escherichia coli O111:H- str. 11128, complete genomeputative inner membrane protein2e-87321
NC_004337:3049118:305165130516513052358708Shigella flexneri 2a str. 301, complete genomeputative transport protein7e-87320
NC_004741:3041294:304382730438273044534708Shigella flexneri 2a str. 2457T, complete genomeputative transport protein7e-87320
NC_017328:3088907:309144030914403092147708Shigella flexneri 2002017 chromosome, complete genomeNa+ channel or pump7e-87320
NC_021066:4906239:492232749223274923040714Raoultella ornithinolytica B6, complete genomePutative inner membrane protein YqgA2e-86318
NC_020260:263528:282740282740283459720Cronobacter sakazakii Sp291, complete genomehypothetical protein4e-82304
NC_013282:3719500:372221837222183722937720Cronobacter turicensis, complete genomeUncharacterized protein yqgA2e-75282
NC_009778:259241:287620287620288240621Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein9e-67253
NC_020181:4800298:480253048025304803246717Enterobacter aerogenes EA1509E, complete genomehypothetical protein4e-57221
NC_016612:477407:500990500990501706717Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein3e-53208
NC_015663:3466471:348237134823713482982612Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein7e-48190
NC_007503:2010858:201085820108582011544687Carboxydothermus hydrogenoformans Z-2901, complete genomehypothetical protein2e-23109
NC_016629:2784000:278926727892672789956690Desulfovibrio africanus str. Walvis Bay chromosome, completehypothetical protein4e-22104
NC_008751:1431905:145139014513901452076687Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeprotein of unknown function DUF5548e-21100
NC_002937:2068117:206811720681172068803687Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completehypothetical protein8e-21100
NC_015565:2879603:287960328796032880298696Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completehypothetical protein2e-2099
NC_018664:287769:306274306274306954681Clostridium acidurici 9a chromosome, complete genomeprotein of unknown function DUF5542e-1996.3
NC_010337:1051425:107688210768821077565684Heliobacterium modesticaldum Ice1, complete genomemembrane protein, putative2e-1996.3
NC_015320:1690047:171059417105941711262669Archaeoglobus veneficus SNP6 chromosome, complete genomehypothetical protein3e-1995.5
NC_015519:2739347:274775027477502748445696Tepidanaerobacter sp. Re1 chromosome, complete genomehypothetical protein2e-1892.8
NC_011297:1357947:136668413666841367358675Dictyoglomus thermophilum H-6-12, complete genomehypothetical protein2e-1892.4
NC_011661:1542335:155106715510671551741675Dictyoglomus turgidum DSM 6724, complete genomeprotein of unknown function DUF5545e-1684.7
NC_015573:1979202:199639919963991997094696Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehypothetical protein5e-1684.7
NC_011969:1816746:183385618338561834572717Bacillus cereus Q1 chromosome, complete genomehypothetical protein3e-1582.4
NC_016779:1688946:170944217094421710158717Bacillus cereus F837/76 chromosome, complete genomehypothetical protein3e-1582
NC_009328:3504454:354017435401743540875702Geobacillus thermodenitrificans NG80-2 chromosome, complete genomehypothetical protein1e-1480.5
NC_010718:2385400:239668023966802397387708Natranaerobius thermophilus JW/NM-WN-LF, complete genomeprotein of unknown function DUF5542e-1479.7
NC_013939:1841890:185713618571361857828693Deferribacter desulfuricans SSM1, complete genomehypothetical protein2e-1479.3
NC_015275:1573916:158816115881611588850690Clostridium lentocellum DSM 5427 chromosome, complete genomeprotein of unknown function DUF5541e-1376.6
NC_010723:1014334:101544410154441016142699Clostridium botulinum E3 str. Alaska E43, complete genomehypothetical protein2e-1168.9
NC_014098:3372000:337419533741953374890696Bacillus tusciae DSM 2912 chromosome, complete genomeprotein of unknown function DUF5546e-1064.3
NC_014150:1099507:111784811178481118546699Brachyspira murdochii DSM 12563 chromosome, complete genomeprotein of unknown function DUF5545e-0961.2
NC_002939:805794:808948808948809634687Geobacter sulfurreducens PCA, complete genomehypothetical protein1e-0860.1
NC_007760:2611608:262306426230642623819756Anaeromyxobacter dehalogenans 2CP-C, complete genomeprotein of unknown function DUF5545e-0858.2
UCMB5137:3660165:367675336767533677436684Bacillus atrophaeus UCMB-5137transport protein2e-0756.6
NC_011145:1732499:175234817523481753103756Anaeromyxobacter sp. K, complete genomeprotein of unknown function DUF5546e-0754.7
NC_010610:908452:931522931522932202681Lactobacillus fermentum IFO 3956, complete genomehypothetical protein7e-0754.3
NC_010376:1433247:143512114351211435813693Finegoldia magna ATCC 29328, complete genomehypothetical protein5e-0651.2