Pre_GI: BLASTP Hits

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Query: NC_003198:2703013:2723548 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 2723548, End: 2723886, Length: 339

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006905:2805877:282490528249052825243339Salmonella enterica subsp. enterica serovar Choleraesuis strribosome associated factor, stabilizes ribosomes against dissociation9e-61231
NC_011080:2789744:281019328101932810531339Salmonella enterica subsp. enterica serovar Newport str. SL254,ribosomal subunit interface protein9e-61231
NC_011149:2701916:272110327211032721441339Salmonella enterica subsp. enterica serovar Agona str. SL483,ribosomal subunit interface protein9e-61231
NC_013850:1198134:119954911995491199884336Klebsiella variicola At-22 chromosome, complete genomeribosomal subunit interface protein6e-56215
CP002516:1196000:119743011974301197771342Escherichia coli KO11, complete genomesigma 54 modulation protein/ribosomal protein S30EA2e-55214
CU928160:2785792:280422028042202804561342Escherichia coli IAI1 chromosome, complete genomecold shock protein associated with 30S ribosomal subunit2e-55214
CP002185:2889656:290808629080862908427342Escherichia coli W, complete genomecold shock protein associated with 30S ribosomal subunit2e-55214
NC_009648:3192483:321044032104403210769330Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genometranslation inhibitor protein RaiA1e-54211
NC_012917:3565268:356632635663263566664339Pectobacterium carotovorum subsp. carotovorum PC1, complete genomesigma 54 modulation protein/ribosomal protein S30EA1e-48191
NC_009665:1495473:150815715081571508513357Shewanella baltica OS185 chromosome, complete genomesigma 54 modulation protein/ribosomal protein S30EA2e-24110
NC_016901:1527877:153977215397721540128357Shewanella baltica OS678 chromosome, complete genomesigma 54 modulation protein/ribosomal protein S30EA3e-23107
NC_009052:1394000:140539914053991405755357Shewanella baltica OS155, complete genomesigma 54 modulation protein/ribosomal protein S30EA3e-23107
NC_011184:597496:598790598790599143354Vibrio fischeri MJ11 chromosome I, complete sequenceribosomal subunit interface protein1e-1581.6
NC_009656:5185704:518931351893135189621309Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein2e-1374.7
NC_015731:990000:991506991506991835330Nitrosomonas sp. Is79A3 chromosome, complete genomesigma 54 modulation protein/30S ribosomal protein S30EA1e-0962
NC_014650:376070:402434402434402985552Geobacillus sp. Y4.1MC1 chromosome, complete genomesigma 54 modulation protein/30S ribosomal protein S30EA2e-0960.8
NC_015660:391627:413815413815414366552Geobacillus thermoglucosidasius C56-YS93 chromosome, completesigma 54 modulation protein/30S ribosomal protein S30EA2e-0960.8
NC_014758:1489761:149427114942711494807537Calditerrivibrio nitroreducens DSM 19672 chromosome, completesigma 54 modulation protein/ribosomal protein s30ea3e-0857
NC_019897:128610:193364193364193918555Thermobacillus composti KWC4 chromosome, complete genomeribosomal subunit interface protein5e-0856.6
NC_014221:38000:434864348644058573Truepera radiovictrix DSM 17093 chromosome, complete genomeribosomal subunit interface protein5e-0856.6
NC_011296:229494:237083237083237604522Thermodesulfovibrio yellowstonii DSM 11347, complete genomeSSU ribosomal protein S30P7e-0855.8
NC_013939:1023443:104295810429581043491534Deferribacter desulfuricans SSM1, complete genomesigma 54 modulation protein/ribosomal protein S30EA7e-0855.8
NC_021182:4427468:442746844274684428004537Clostridium pasteurianum BC1, complete genomeribosomal subunit interface protein1e-0755.5
NC_013791:1082951:108295110829511083508558Bacillus pseudofirmus OF4 chromosome, complete genomeribosomal protein S30AE familyprotein1e-0755.1
NC_012781:2802000:282365028236502824177528Eubacterium rectale ATCC 33656, complete genomeribosome-associated protein Y (PSrp-1)2e-0754.7
NC_015949:1957185:197012119701211970666546Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomesigma 54 modulation protein/30S ribosomal protein S30EA2e-0754.7
NC_014721:508000:517901517901518446546Caldicellulosiruptor kristjanssonii 177R1B chromosome, completesigma 54 modulation protein/ribosomal protein s30ea2e-0754.7
NC_009437:1481064:149081514908151491363549Caldicellulosiruptor saccharolyticus DSM 8903, complete genomesigma 54 modulation protein/ribosomal protein S30EA2e-0754.7
NC_014831:218696:223839223839224402564Thermaerobacter marianensis DSM 12885 chromosome, complete genomeSSU ribosomal protein S30P;sigma 54 modulation protein3e-0753.9
NC_019896:577594:593422593422593994573Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein3e-0753.9
NC_017195:3426000:342992234299223430491570Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeYvyD3e-0753.9
NC_015873:2294312:229882822988282299352525Megasphaera elsdenii DSM 20460, complete genomeribosomal subunit interface protein3e-0753.5
NC_019978:2220863:223713922371392237684546Halobacteroides halobius DSM 5150, complete genomeribosomal subunit interface protein5e-0753.1
NC_014829:3822125:385033638503363850899564Bacillus cellulosilyticus DSM 2522 chromosome, complete genomesigma 54 modulation protein/ribosomal protein S30EA9e-0752.4
NC_003997:4876415:491113849111384911680543Bacillus anthracis str. Ames, complete genomeribosomal subunit interface protein1e-0652
NC_006274:4940922:497224749722474972789543Bacillus cereus E33L, complete genomeribosomal subunit interface protein1e-0652
NC_008600:4898000:492758549275854928127543Bacillus thuringiensis str. Al Hakam, complete genomeribosomal subunit interface protein1e-0652
NC_016771:4882886:488953848895384890080543Bacillus cereus NC7401, complete genomeribosomal subunit interface protein1e-0652
NC_011969:4841358:487202648720264872568543Bacillus cereus Q1 chromosome, complete genomeribosomal subunit interface protein1e-0652
NC_011658:4925346:493721549372154937757543Bacillus cereus AH187 chromosome, complete genomeribosomal subunit Interface protein1e-0652
NC_007530:4877500:491126449112644911806543Bacillus anthracis str. 'Ames Ancestor', complete genomeribosomal subunit interface protein1e-0652
NC_014335:4848389:486075348607534861295543Bacillus cereus biovar anthracis str. CI chromosome, completeribosomal subunit interface protein1e-0652
NC_012472:4908245:493785149378514938393543Bacillus cereus 03BB102, complete genomeribosomal subunit interface protein1e-0652
NC_005945:4898841:491247549124754913017543Bacillus anthracis str. Sterne, complete genomeribosomal subunit interface protein1e-0652
NC_011773:4940921:497245649724564972998543Bacillus cereus AH820 chromosome, complete genomeribosomal subunit interface protein1e-0652
NC_012581:4882525:491358749135874914129543Bacillus anthracis str. CDC 684 chromosome, complete genomeribosomal subunit interface protein1e-0652
NC_012659:4877410:491116449111644911706543Bacillus anthracis str. A0248, complete genomeribosomal subunit interface protein1e-0652
NC_016779:4864056:489258448925844893126543Bacillus cereus F837/76 chromosome, complete genomeRibosomal subunit interface protein1e-0652
NC_017208:5143500:515552651555265156068543Bacillus thuringiensis serovar chinensis CT-43 chromosome, completesigma (54) modulation protein/30S ribosomal protein S301e-0652
NC_017200:4995075:503104650310465031588543Bacillus thuringiensis serovar finitimus YBT-020 chromosome,ribosomal subunit interface protein1e-0651.6
NC_003909:4854379:488419748841974884739543Bacillus cereus ATCC 10987, complete genomeribosomal subunit interface protein1e-0651.6
NC_005957:4904000:491592349159234916465543Bacillus thuringiensis serovar konkukian str. 97-27, completeribosomal subunit interface protein1e-0651.6
NC_014171:4959248:499549249954924996034543Bacillus thuringiensis BMB171 chromosome, complete genomesigma (54) modulation protein/SSU ribosomal protein S30P3e-0650.4
NC_011725:5075285:510592451059245106466543Bacillus cereus B4264 chromosome, complete genomeribosomal subunit interface protein3e-0650.4
NC_004193:2553630:255798125579812558538558Oceanobacillus iheyensis HTE831, complete genomehypothetical protein3e-0650.4
NC_011772:5021404:505237050523705052912543Bacillus cereus G9842, complete genomeribosomal subunit interface protein3e-0650.4
NC_010184:4909183:494423049442304944772543Bacillus weihenstephanensis KBAB4, complete genomesigma 54 modulation protein/ribosomal protein S30EA3e-0650.4
NC_010718:2337209:236053523605352361071537Natranaerobius thermophilus JW/NM-WN-LF, complete genomesigma 54 modulation protein, SSU ribosomal protein S30P4e-0650.1
NC_015601:1107961:114892111489211149463543Erysipelothrix rhusiopathiae str. Fujisawa, complete genomeribosomal protein S30Ae/sigma 54 modulation protein6e-0649.7
NC_009922:2672396:269269126926912693236546Alkaliphilus oremlandii OhILAs, complete genomesigma 54 modulation protein/ribosomal protein S30EA8e-0648.9