Pre_GI: BLASTP Hits

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Query: NC_003198:1908238:1925785 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 1925785, End: 1925988, Length: 204

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009801:1419324:142441614244161424562147Escherichia coli E24377A, complete genomehypothetical protein7e-1682.4
AC_000091:1191353:120335312033531203661309Escherichia coli W3110 DNA, complete genomehypothetical protein4e-1373.6
NC_000913:1188999:120099912009991201307309Escherichia coli K12, complete genomee14 prophage; predicted protein4e-1373.6