Pre_GI: BLASTP Hits

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Query: NC_003198:1908238:1914557 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 1914557, End: 1915114, Length: 558

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013361:1558423:157622315762231576957735Escherichia coli O26:H11 str. 11368 chromosome, complete genomeantirepressor protein1e-60231
NC_017046:2756000:275913127591312759694564Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage protein3e-47187
NC_016856:2812905:281360028136002814163564Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Santirepressor-like protein3e-47187
NC_011080:2761403:276209827620982762661564Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein3e-47187
NC_015761:1017301:102079710207971021369573Salmonella bongori NCTC 12419, complete genomebacteriophage protein6e-45179
NC_007712:3067000:309322930932293094017789Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein1e-43175
NC_016822:3065426:306682230668223067385564Shigella sonnei 53G, complete genomebacteriophage protein7e-43173
NC_007384:2933625:293551829355182936279762Shigella sonnei Ss046, complete genomeputative bacteriophage protein9e-43172
NC_011415:2277559:229645222964522297246795Escherichia coli SE11 chromosome, complete genomehypothetical protein1e-38158
NC_009801:2193000:221002722100272210821795Escherichia coli E24377A, complete genomehypothetical protein1e-38158
NC_007712:4023516:405624040562404057010771Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein3e-28124
NC_011094:638552:655772655772656566795Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein7e-28123
NC_009699:2552195:256798325679832568834852Clostridium botulinum F str. Langeland chromosome, complete genomehypothetical protein4e-24110
NC_017297:2531750:256812225681222568973852Clostridium botulinum F str. 230613 chromosome, complete genomehypothetical protein4e-24110
NC_008526:506263:507157507157507915759Lactobacillus casei ATCC 334, complete genomePhage anti-repressor protein1e-22105
NC_010999:561914:565165565165565905741Lactobacillus casei, complete genomeAnti-repressor1e-22105
NC_012984:1027898:102877910287791029513735Lactobacillus plantarum JDM1, complete genomePhage anti-repressor protein3e-21101
NC_010516:2676746:270857727085772709377801Clostridium botulinum B1 str. Okra, complete genomephage protein5e-21100
NC_008497:1111891:113078911307891131571783Lactobacillus brevis ATCC 367, complete genomePhage anti-repressor protein3e-2097.8
NC_009706:3291330:332760733276073328413807Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein3e-1994.7
NC_011837:3226500:325910932591093259915807Clostridium kluyveri NBRC 12016, complete genomehypothetical protein3e-1994.7
NC_009436:1141376:115310011531001153813714Enterobacter sp. 638, complete genomehypothetical protein1e-1892.8
NC_009089:1093832:109454810945481095342795Clostridium difficile 630, complete genomephage protein2e-1788.6
NC_015425:1295261:129889312988931299675783Clostridium botulinum BKT015925 chromosome, complete genomephage protein7e-1787
NC_013315:1679000:168033416803341681137804Clostridium difficile CD196 chromosome, complete genomephage anti-repressor7e-1786.7
NC_008527:1036757:104033510403351041057723Lactococcus lactis subsp. cremoris SK11, complete genomePhage anti-repressor protein4e-1580.9
NC_014136:1879049:188352618835261884326801Leuconostoc kimchii IMSNU11154 chromosome, complete genomeprophage pi2 protein 063e-0651.6