Pre_GI: BLASTP Hits

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Query: NC_003198:1867456:1873610 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 1873610, End: 1874331, Length: 722

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011094:1923870:193002419300241930746723Salmonella enterica subsp. enterica serovar Schwarzengrund strguanine nucleotide exchange factor SopE2e-0756.2
NC_011080:1944226:195038019503801951102723Salmonella enterica subsp. enterica serovar Newport str. SL254,guanine nucleotide exchange factor SopE2e-0756.2
NC_011083:1993672:199982019998202000542723Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,guanine nucleotide exchange factor SopE2e-0756.2
NC_003197:1945858:195201219520121952734723Salmonella typhimurium LT2, complete genometype III-secreted effector protein2e-0756.2
NC_011205:1391971:141497014149701415692723Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853guanine nucleotide exchange factor SopE2e-0756.2
NC_016810:1903426:190958019095801910302723Salmonella enterica subsp. enterica serovar Typhimurium strinvasion-associated secreted effector protein (sopE2)2e-0756.2
NC_016831:1690811:169696016969601697682723Salmonella enterica subsp. enterica serovar Gallinarum/pulloruminvasion-associated secreted effector protein (sopE2)2e-0756.2
NC_016856:1957263:196341719634171964139723Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Stype III-secreted effector protein2e-0756.2
NC_016857:1903426:190958019095801910302723Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74type III-secreted effector protein2e-0756.2
NC_016860:1943203:194935719493571950079723Salmonella enterica subsp. enterica serovar Typhimurium strguanine nucleotide exchange factor SopE2e-0756.2
NC_016863:1905454:191160819116081912330723Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1type III-secreted effector protein2e-0756.2
NC_006905:1961774:196796219679621968684723Salmonella enterica subsp. enterica serovar Choleraesuis strTypeIII-secreted protein effector: invasion-associated protein2e-0756.2