Pre_GI: BLASTP Hits

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Query: NC_003198:1771432:1793714 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 1793714, End: 1794103, Length: 390

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004631:1182883:118702911870291187418390Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative regulator2e-67253
NC_016832:1182496:118601311860131186390378Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein3e-65246
NC_014121:1589389:162039116203911620783393Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeInvasion gene expression up-regulator6e-43172
NC_021066:839734:875516875516875908393Raoultella ornithinolytica B6, complete genomehypothetical protein8e-36148
NC_007404:974461:100538310053831005766384Thiobacillus denitrificans ATCC 25259, complete genomehypothetical protein4e-1373.2
NC_014532:2146466:215838721583872158773387Halomonas elongata DSM 2581, complete genomeinvasion gene expression up-regulator, SirB4e-0960.1
NC_008702:3375027:339261933926193393011393Azoarcus sp. BH72, complete genomeconserved hypothetical membrane protein3e-0857
NC_015581:1791658:180696318069631807334372Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomeInvasion gene expression up-regulator SirB2e-0651.2