Pre_GI: BLASTP Hits

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Query: NC_003198:1336894:1350926 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 1350926, End: 1351264, Length: 339

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:1267005:128102812810281281366339Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein1e-62237
NC_006511:1273162:128718512871851287523339Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein1e-62237
NC_004631:1623511:162991816299181630256339Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein1e-62237
NC_006905:1766000:177241217724121772750339Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein1e-62237
NC_011094:1726000:173242917324291732767339Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein4e-62236
NC_011080:1750000:175560417556041755942339Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein1e-61234
NC_011149:1429523:144354714435471443885339Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein3e-61233
NC_016860:1752000:175705417570541757278225Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein3e-38156
NC_008702:4064470:406555640655564065882327Azoarcus sp. BH72, complete genomeconserved hypothetical protein6e-1786.3