Pre_GI: BLASTP Hits

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Query: NC_003198:1078113:1097595 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 1097595, End: 1098035, Length: 441

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004631:1881214:188277818827781883218441Salmonella enterica subsp. enterica serovar Typhi Ty2, completehomoprotocatechuate degradative operon repressor3e-74276
NC_011083:1173802:119223211922321192672441Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,homoprotocatechuate degradation operon regulator, HpaR8e-74275
NC_011149:1035990:105749610574961057936441Salmonella enterica subsp. enterica serovar Agona str. SL483,homoprotocatechuate degradation operon regulator, HpaR8e-74275
NC_011080:1166951:118984211898421190282441Salmonella enterica subsp. enterica serovar Newport str. SL254,homoprotocatechuate degradation operon regulator, HpaR8e-74275
NC_003197:1170746:118750611875061187946441Salmonella typhimurium LT2, complete genome4-hydroxyphenylacetate catabolism8e-74275
NC_006511:1808815:181037818103781810818441Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChomoprotocatechuate degradative operon repressor8e-74275
NC_011094:1127983:114617711461771146617441Salmonella enterica subsp. enterica serovar Schwarzengrund strhomoprotocatechuate degradation operon regulator, HpaR8e-74275
NC_011147:1802535:180556118055611806001441Salmonella enterica subsp. enterica serovar Paratyphi A strhomoprotocatechuate degradative operon repressor8e-74275
NC_011205:1147556:116600311660031166443441Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853homoprotocatechuate degradation operon regulator, HpaR8e-74275
NC_011274:1057887:107464310746431075083441Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91homoprotocatechuate degradative operon repressor8e-74275
NC_011294:1048223:106535410653541065794441Salmonella enterica subsp. enterica serovar Enteritidis strhomoprotocatechuate degradative operon repressor8e-74275
NC_016810:1126693:114382811438281144268441Salmonella enterica subsp. enterica serovar Typhimurium strhomoprotocatechuate degradative operon repressor8e-74275
NC_016856:1128715:114585011458501146290441Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S4-hydroxyphenylacetate catabolism8e-74275
NC_016857:1126693:114382811438281144268441Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/744-hydroxyphenylacetate catabolism8e-74275
NC_016860:1168431:118519111851911185631441Salmonella enterica subsp. enterica serovar Typhimurium strhomoprotocatechuate degradation operon regulator HpaR8e-74275
NC_016863:1128381:114514111451411145581441Salmonella enterica subsp. enterica serovar Typhimurium str. UK-14-hydroxyphenylacetate catabolism8e-74275
NC_017046:1127325:114408511440851144525441Salmonella enterica subsp. enterica serovar Typhimurium str. 798homoprotocatechuate degradative operon repressor8e-74275
NC_012962:1068102:107551310755131075950438Photorhabdus asymbiotica, complete genomehomoprotocatechuate degradative operon repressor6e-49192
NC_012721:2223641:224610822461082246548441Burkholderia glumae BGR1 chromosome 2, complete genomeRegulatory protein, MarR1e-23108
NC_021150:3303959:331548633154863315764279Azotobacter vinelandii CA6, complete genomehomoprotocatechuate degradation operon regulator, HpaR protein4e-1787
NC_012560:3303961:331548833154883315766279Azotobacter vinelandii DJ, complete genomehomoprotocatechuate degradation operon regulator, HpaR protein4e-1787
NC_015382:266000:267737267737268216480Burkholderia gladioli BSR3 plasmid bgla_1p, complete sequencetranscriptional regulator MarR family6e-1682.8
NC_015942:447308:460132460132460623492Acidithiobacillus ferrivorans SS3 chromosome, complete genomeMarR family transcriptional regulator5e-0960.1
NC_015677:3685452:368943436894343689940507Ramlibacter tataouinensis TTB310 chromosome, complete genometranscriptional regulator OhrR1e-0858.5
NC_008261:1249595:126278412627841263206423Clostridium perfringens ATCC 13124, complete genometranscriptional regulator, MarR family4e-0857
NC_009725:692237:719938719938720450513Bacillus amyloliquefaciens FZB42, complete genomeYetL2e-0651.6
NC_017353:646195:663756663756664184429Staphylococcus lugdunensis N920143, complete genomeMarR family regulatory protein2e-0651.2