Pre_GI: BLASTP Hits

Some Help

Query: NC_003198:1078113:1088687 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 1088687, End: 1090372, Length: 1686

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:1880174:1887291188729118889761686Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Inositol phosphate phosphatase sopB01121
NC_004631:1881214:1890441189044118921261686Salmonella enterica subsp. enterica serovar Typhi Ty2, completecell invasion protein01121
NC_011205:1147556:1156728115672811584131686Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853inositol phosphate phosphatase SopB01108
NC_011083:1173802:1182956118295611846411686Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,inositol phosphate phosphatase SopB01107
NC_016857:1126693:1134553113455311362921740Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74secreted effector protein01106
NC_011294:1048223:1056079105607910577641686Salmonella enterica subsp. enterica serovar Enteritidis strcell invasion protein01105
NC_011147:1802535:1813592181359218152771686Salmonella enterica subsp. enterica serovar Paratyphi A strcell invasion protein01105
NC_006511:1808815:1818409181840918200941686Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCcell invasion protein01105
NC_003197:1170746:1178231117823111799161686Salmonella typhimurium LT2, complete genomesecreted effector protein01105
NC_012125:2687980:2695352269535226970371686Salmonella enterica subsp. enterica serovar Paratyphi C straincell invasion protein01105
NC_016810:1126693:1134553113455311362381686Salmonella enterica subsp. enterica serovar Typhimurium strcell invasion protein01105
NC_016831:1950650:1958022195802219597071686Salmonella enterica subsp. enterica serovar Gallinarum/pullorumcell invasion protein01105
NC_016856:1128715:1136575113657511382601686Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Ssecreted effector protein01105
NC_016860:1168431:1175916117591611776011686Salmonella enterica subsp. enterica serovar Typhimurium strcell invasion protein01105
NC_016863:1128381:1135866113586611375511686Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1secreted effector protein01105
NC_017046:1127325:1134810113481011364951686Salmonella enterica subsp. enterica serovar Typhimurium str. 798cell invasion protein01105
NC_011274:1057887:1065368106536810670531686Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91cell invasion protein01104
NC_011094:1127983:1136902113690211385871686Salmonella enterica subsp. enterica serovar Schwarzengrund strinositol phosphate phosphatase SopB01104
NC_011080:1166951:1180567118056711822521686Salmonella enterica subsp. enterica serovar Newport str. SL254,inositol phosphate phosphatase SopB01101
NC_011149:1035990:1048221104822110499061686Salmonella enterica subsp. enterica serovar Agona str. SL483,inositol phosphate phosphatase SopB01100
NC_010102:2020762:2028207202820720298081602Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein01048
NC_010067:1829041:1836202183620218378871686Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein01021