Pre_GI: BLASTP Hits

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Query: NC_003198:1078113:1079407 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 1079407, End: 1079724, Length: 318

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016857:1126693:112669311266931127010318Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hemimethylated DNA binding protein6e-56215
NC_004631:1881214:190108919010891901406318Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein6e-56215
NC_010102:2020762:203734920373492037666318Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-56215
NC_011149:1035990:103992710399271040244318Salmonella enterica subsp. enterica serovar Agona str. SL483,hemimethylated DNA-binding protein6e-56215
NC_011083:1173802:117509611750961175413318Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hemimethylated DNA-binding protein6e-56215
NC_011094:1127983:112927711292771129594318Salmonella enterica subsp. enterica serovar Schwarzengrund strheat shock protein HspQ6e-56215
NC_011205:1147556:114885011488501149167318Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853heat shock protein HspQ6e-56215
NC_011294:1048223:104822310482231048540318Salmonella enterica subsp. enterica serovar Enteritidis strheat shock protein HspQ6e-56215
NC_012125:2687980:270457827045782704895318Salmonella enterica subsp. enterica serovar Paratyphi C strainheat shock protein HspQ6e-56215
NC_016810:1126693:112669311266931127010318Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein6e-56215
NC_016831:1950650:196724719672471967564318Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein6e-56215
NC_016832:1880174:189793918979391898256318Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Heat shock protein hspQ6e-56215
NC_016856:1128715:112871511287151129032318Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative inner membrane protein6e-56215
NC_006511:1808815:182763518276351827952318Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein1e-55214
NC_010067:1829041:185368518536851854002318Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-55214
NC_011147:1802535:182281818228181823135318Salmonella enterica subsp. enterica serovar Paratyphi A strheat shock protein HspQ1e-55214
NC_013716:1138441:113974311397431140060318Citrobacter rodentium ICC168, complete genomehypothetical protein1e-52204
NC_014618:2989000:300488030048803005197318Enterobacter cloacae SCF1 chromosome, complete genomehemimethylated DNA binding protein6e-52202
NC_008150:844727:849006849006849323318Yersinia pestis Antiqua, complete genomehypothetical protein1e-42171
NC_010634:1755548:175706917570691757386318Yersinia pseudotuberculosis PB1/+, complete genomehemimethylated DNA binding protein1e-42171
NC_008149:2802392:284627228462722846589318Yersinia pestis Nepal516, complete genomehypothetical protein1e-42171
NC_014029:1702338:170661717066171706934318Yersinia pestis Z176003 chromosome, complete genomehypothetical protein1e-42171
NC_017154:1644404:164868416486841649001318Yersinia pestis D106004 chromosome, complete genomehypothetical protein1e-42171
NC_017160:1628500:162917916291791629496318Yersinia pestis D182038 chromosome, complete genomehypothetical protein1e-42171
NC_017168:3977767:402156540215654021882318Yersinia pestis A1122 chromosome, complete genomeheat shock protein HspQ1e-42171
NC_006155:1756000:175682117568211757162342Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein1e-42171
NC_003143:1630000:163710116371011637442342Yersinia pestis CO92, complete genomehypothetical protein1e-42171
NC_012880:3125261:314425331442533144561309Dickeya dadantii Ech703, complete genomehemimethylated DNA binding protein1e-31134
NC_013421:3093995:311058031105803110888309Pectobacterium wasabiae WPP163, complete genomehemimethylated DNA binding protein3e-31133