Pre_GI: BLASTP Hits

Some Help

Query: NC_003197:920000:940593 Salmonella typhimurium LT2, complete genome

Start: 940593, End: 941804, Length: 1212

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:920346:9409349409349421451212Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative transport protein/regulator0668
NC_016860:959609:9801979801979814081212Salmonella enterica subsp. enterica serovar Typhimurium strputative transport protein/regulator0668
NC_016856:921057:9416459416459428561212Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative transport protein/regulator0668
NC_011083:967260:9878609878609890711212Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,inner membrane protein YbjJ0666
NC_011080:924326:9449279449279461381212Salmonella enterica subsp. enterica serovar Newport str. SL254,inner membrane protein YbjJ0665
NC_006905:946418:9683409683409695511212Salmonella enterica subsp. enterica serovar Choleraesuis strputative transport protein/putative regulatorn0665
NC_012125:894955:9155419155419167521212Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein0665
NC_016810:919266:9398549398549410651212Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein0665
NC_016857:919266:9398549398549410651212Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative transport protein/regulator0665
NC_017046:919249:9398369398369410471212Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein0665
NC_011094:973140:9937239937239949341212Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein0665
NC_011205:944125:9647299647299659401212Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein0663
NC_011294:878896:8994858994859006961212Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein0662
NC_011274:896802:9173929173929186031212Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein0656
NC_012947:2898179:2911127291112729123351209Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completemajor facilitator superfamily MFS_16e-168590
NC_011601:846358:8505138505138517211209Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometransporter2e-167588
NC_009436:1466580:1470176147017614713901215Enterobacter sp. 638, complete genomemajor facilitator transporter1e-164579
NC_016845:1773416:1776419177641917776211203Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative DEOR-type transcriptional regulator4e-156551
NC_016612:3361802:3366927336692733681291203Klebsiella oxytoca KCTC 1686 chromosome, complete genomemajor facilitator superfamily protein2e-154545
NC_008752:725189:762900762900763748849Acidovorax avenae subsp. citrulli AAC00-1, complete genomeintegral membrane protein3e-51202
NC_011886:4336417:4366851436685143680441194Arthrobacter chlorophenolicus A6, complete genomemajor facilitator superfamily MFS_18e-47188
NC_013174:601434:6138556138556151321278Jonesia denitrificans DSM 20603, complete genomemajor facilitator superfamily MFS_18e-47187
NC_014550:2091797:2126004212600421272211218Arthrobacter arilaitensis Re117, complete genomeputative MFS superfamily transporter5e-36152
NC_009664:1569335:1612590161259016138191230Kineococcus radiotolerans SRS30216, complete genomemajor facilitator superfamily MFS_12e-34147
NC_016109:8256000:8257909825790982591051197Kitasatospora setae KM-6054, complete genomeputative major facilitator superfamily transporter4e-22106
NC_013174:601434:6125276125276138581332Jonesia denitrificans DSM 20603, complete genomemajor facilitator superfamily MFS_19e-2098.2
NC_015957:7249873:726439172643917264651261Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-1894.7
NC_020911:18500:2219922199233261128Octadecabacter antarcticus 307, complete genomeputative MFS-type transporter7e-1892
NC_008463:1293079:1328895132889513301931299Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein3e-1790.1
NC_018750:3481476:3488879348887934900811203Streptomyces venezuelae ATCC 10712, complete genomeputative transmembrane transport protein5e-1789.4
NC_020908:4263552:4275886427588642770641179Octadecabacter arcticus 238, complete genomeputative MFS-type transporter1e-1688.2
NC_008800:2695977:2707420270742027085921173Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative inner membrane protein5e-1582.8
NC_015224:2701914:2714096271409627151811086Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative inner membrane protein2e-1480.9
NC_014532:2146466:2149485214948521506211137Halomonas elongata DSM 2581, complete genomemajor facilitator superfamily transporter2e-1480.5
NC_007777:461500:4802454802454815761332Frankia sp. CcI3, complete genomemajor facilitator superfamily MFS_19e-1375.1
NC_015496:2155816:2170055217005521712121158Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomemajor facilitator superfamily MFS_12e-1170.9
NC_008752:725189:761255761255761572318Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein3e-1169.7
NC_018145:50237:6841168411695321122Zymomonas mobilis subsp. mobilis ATCC 29191 chromosome, completemajor facilitator superfamily protein8e-1168.6
NC_015224:647341:6578566578566590311176Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative membrane transport protein2e-0963.9
NC_013174:309943:3109233109233121491227Jonesia denitrificans DSM 20603, complete genomemajor facilitator superfamily MFS_16e-0858.9
NC_010003:449192:4547234547234559071185Petrotoga mobilis SJ95, complete genomemajor facilitator superfamily MFS_16e-0652.4
NC_013093:1213908:1239473123947312406631191Actinosynnema mirum DSM 43827, complete genomemajor facilitator superfamily MFS_11e-0551.6