Pre_GI: BLASTP Hits

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Query: NC_003197:815964:831919 Salmonella typhimurium LT2, complete genome

Start: 831919, End: 833220, Length: 1302

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016860:857500:8707478707478720481302Salmonella enterica subsp. enterica serovar Typhimurium stroxaloacetate decarboxylase subunit beta0678
NC_011294:781170:7910677910677923681302Salmonella enterica subsp. enterica serovar Enteritidis stroxaloacetate decarboxylase subunit beta0674
NC_016863:819478:8322598322598335601302Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative oxalacetate decarboxylase subunit beta0673
NC_016856:819482:8322598322598335601302Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Soxaloacetate decarboxylase subunit beta0673
NC_006905:848000:8605578605578618581302Salmonella enterica subsp. enterica serovar Choleraesuis strputative oxalacetate decarboxylase, subunit beta0673
NC_016810:819489:8311738311738324741302Salmonella enterica subsp. enterica serovar Typhimurium stroxaloacetate decarboxylase subunit beta0672
NC_016857:819429:8311738311738324741302Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative oxalacetate decarboxylase subunit beta0672
NC_011205:839425:8561008561008574011302Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853oxaloacetate decarboxylase beta chain0672
NC_012125:793812:8091178091178104181302Salmonella enterica subsp. enterica serovar Paratyphi C strainoxaloacetate decarboxylase subunit beta0672
NC_017046:819414:8311618311618324621302Salmonella enterica subsp. enterica serovar Typhimurium str. 798oxaloacetate decarboxylase beta chain 20671
NC_016831:2209834:2212886221288622141871302Salmonella enterica subsp. enterica serovar Gallinarum/pullorumoxaloacetate decarboxylase subunit beta0669
NC_011149:779903:7955897955897968901302Salmonella enterica subsp. enterica serovar Agona str. SL483,oxaloacetate decarboxylase beta chain0669
NC_011080:819103:8362708362708375711302Salmonella enterica subsp. enterica serovar Newport str. SL254,oxaloacetate decarboxylase beta chain0668
NC_011274:793681:8089568089568102301275Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91oxaloacetate decarboxylase subunit beta0664
NC_011083:862901:8801538801538814541302Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,oxaloacetate decarboxylase beta chain0655
NC_013850:4612812:4614597461459746158981302Klebsiella variicola At-22 chromosome, complete genomesodium ion-translocating decarboxylase, beta subunit0637
NC_011283:4767269:4769054476905447703551302Klebsiella pneumoniae 342 chromosome, complete genomeoxaloacetate decarboxylase subunit beta0636
NC_009648:838000:8521408521408534411302Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative oxaloacetate decarboxylase beta chain0634
NC_013166:1341575:1341575134157513428731299Kangiella koreensis DSM 16069, complete genomesodium ion-translocating decarboxylase, beta subunit5e-107388
NC_010506:2146444:2163698216369821648281131Shewanella woodyi ATCC 51908, complete genomesodium ion-translocating decarboxylase, beta subunit4e-94345
NC_014935:1223817:1253859125385912552141356Nitratifractor saLSUginis DSM 16511 chromosome, complete genomesodium ion-translocating decarboxylase, beta subunit7e-89327
NC_014633:837588:8649218649218661081188Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceglutaconyl-CoA decarboxylase beta subunit2e-84312
NC_014632:336000:3467903467903479771188Ilyobacter polytropus DSM 2926 chromosome, complete genomeglutaconate CoA transferase subunit B2e-84312
NC_009922:490500:4991034991035001671065Alkaliphilus oremlandii OhILAs, complete genomesodium ion-translocating decarboxylase, beta subunit2e-80300
NC_000868:834872:8525348525348537361203Pyrococcus abyssi GE5, complete genomeMethylmalonyl-CoA decarboxylase, beta subunit4e-78292
NC_013410:1953293:1954558195455819557181161Fibrobacter succinogenes subsp. succinogenes S85 chromosome,sodium ion-translocating decarboxylase subunit beta5e-78291
NC_019942:987134:1058309105830910594181110Aciduliprofundum sp. MAR08-339, complete genomesodium ion-translocating decarboxylase, beta subunit1e-77290
NC_015680:465803:4838384838384850401203Pyrococcus yayanosii CH1 chromosome, complete genomemethylmalonyl-CoA decarboxylase subunit beta3e-77289
NC_014964:923681:9497899497899509041116Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completesodium ion-translocating decarboxylase subunit beta1e-75284
NC_014538:1075720:1086098108609810872131116Thermoanaerobacter sp. X513 chromosome, complete genomesodium ion-translocating decarboxylase subunit beta1e-75283
NC_010320:1860801:1867131186713118682461116Thermoanaerobacter sp. X514 chromosome, complete genomesodium ion-translocating decarboxylase subunit beta1e-75283
NC_010321:947233:9575969575969587111116Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completesodium ion-translocating decarboxylase subunit beta4e-75282
NC_003454:822804:8266828266828278091128Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeGlutaconyl-COA decarboxylase beta subunit6e-69261
NC_003228:3645426:3648904364890436500641161Bacteroides fragilis NCTC 9343, complete genomeputative methylmalonyl-CoA decarboxylase, beta subunit5e-68258
NC_006347:3735887:3741241374124137424011161Bacteroides fragilis YCH46, complete genomeoxaloacetate decarboxylase beta chain5e-68258
NC_016776:3691453:3694401369440136955611161Bacteroides fragilis 638R, complete genomeputative methylmalonyl-CoA decarboxylase, beta subunit5e-68258
NC_015164:3431279:3453002345300234541621161Bacteroides salanitronis DSM 18170 chromosome, complete genomesodium ion-translocating decarboxylase, beta subunit2e-66253
NC_015571:722815:7275357275357286861152Porphyromonas gingivalis TDC60, complete genomemethylmalonyl-CoA decarboxylase subunit beta5e-66252
NC_011565:750168:7647757647757659291155Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,Na+-transporting methylmalonyl-CoA decarboxylase beta subunit3e-64246
NC_009718:1411793:1416674141667414178251152Fervidobacterium nodosum Rt17-B1, complete genomesodium ion-translocating decarboxylase, beta subunit2e-62239
NC_017316:2710021:2731151273115127322661116Enterococcus faecalis OG1RF chromosome, complete genomeglutaconyl-CoA decarboxylase8e-61234
NC_004668:3184319:3209789320978932108741086Enterococcus faecalis V583, complete genomesodium ion-translocating decarboxylase, beta subunit7e-61234
NC_014933:3637172:3652321365232136535561236Bacteroides helcogenes P 36-108 chromosome, complete genomesodium ion-translocating decarboxylase, beta subunit2e-52207
NC_012225:2333500:2348985234898523501121128Brachyspira hyodysenteriae WA1, complete genomeNa+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit2e-37157
NC_004663:5817782:5818348581834858195621215Bacteroides thetaiotaomicron VPI-5482, complete genomeputative decarboxylase beta subunit8e-1582
NC_007759:1169547:1186763118676311879651203Syntrophus aciditrophicus SB, complete genomeNa+-transporting decarboxylase, beta subunit4e-1169.7