Pre_GI: BLASTP Hits

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Query: NC_003197:815964:828571 Salmonella typhimurium LT2, complete genome

Start: 828571, End: 829818, Length: 1248

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016860:857500:8673808673808686481269Salmonella enterica subsp. enterica serovar Typhimurium stranion transporter0778
NC_011149:779903:7922257922257934931269Salmonella enterica subsp. enterica serovar Agona str. SL483,anion transporter0775
NC_016856:819482:8289138289138301601248Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cation transporter0775
NC_016863:819478:8289138289138301601248Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cation transporter0775
NC_010102:2287934:2294382229438222956501269Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein0775
NC_011083:862901:8767898767898780571269Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,anion transporter0775
NC_011205:839425:8527338527338540011269Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853anion transporter0775
NC_016810:819489:8278068278068290741269Salmonella enterica subsp. enterica serovar Typhimurium strputative cation transporter0775
NC_016857:819429:8278068278068290741269Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative divalent ion symporter0775
NC_017046:819414:8277918277918290591269Salmonella enterica subsp. enterica serovar Typhimurium str. 798cation transporter0775
NC_012125:793812:8057508057508070181269Salmonella enterica subsp. enterica serovar Paratyphi C straincation transporter0774
NC_016831:2209834:2216286221628622175541269Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein0773
NC_011080:819103:8329038329038341711269Salmonella enterica subsp. enterica serovar Newport str. SL254,anion transporter0773
NC_006905:848000:8571968571968584641269Salmonella enterica subsp. enterica serovar Choleraesuis strputative cation transporter0769
NC_011274:793681:8055978055978068651269Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91cation transporter0765
NC_009648:838000:8487758487758500431269Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative response regulator, membrane protein0709
NC_013850:4612812:4622887462288746241491263Klebsiella variicola At-22 chromosome, complete genomeanion transporter5e-74278
NC_011283:4767269:4777344477734447786061263Klebsiella pneumoniae 342 chromosome, complete genometransporter divalent anion:Na+ symporter (DASS) family5e-74278
NC_014624:287500:2952402952402965141275Eubacterium limosum KIST612 chromosome, complete genometransporter4e-55215
NC_007519:1244198:1266034126603412673801347Desulfovibrio alaskensis G20 chromosome, complete genomecation transporter1e-50200
NC_016048:3899878:3909090390909039103611272Oscillibacter valericigenes Sjm18-20, complete genomecitrate transporter family protein9e-50197
NC_010718:2860096:2860096286009628613401245Natranaerobius thermophilus JW/NM-WN-LF, complete genomeanion transporter7e-47188
NC_016048:797762:8076438076438089141272Oscillibacter valericigenes Sjm18-20, complete genomecitrate transporter family protein4e-27122
NC_013173:1259898:1292156129215612939701815Desulfomicrobium baculatum DSM 4028, complete genomeCitrate transporter3e-21103
NC_015733:3736104:3736104373610437379331830Pseudomonas putida S16 chromosome, complete genomecitrate transporter3e-1893.2
NC_010554:1871000:1893195189319518950241830Proteus mirabilis HI4320, complete genomecation transporter3e-1893.2
NC_010465:868402:8818248818248832031380Yersinia pseudotuberculosis YPIII, complete genomeanion transporter4e-1892.8
NC_009635:905768:9087559087559101251371Methanococcus aeolicus Nankai-3 chromosome, complete genomeanion transporter8e-1891.7
NC_006155:3846315:3856201385620138575801380Yersinia pseudotuberculosis IP 32953, complete genomeSodium:sulfate symporter, DASS family1e-1791.3
NC_010634:3762532:3769257376925737706361380Yersinia pseudotuberculosis PB1/+, complete genomeanion transporter1e-1791.3
NC_009708:853063:8625748625748639531380Yersinia pseudotuberculosis IP 31758 chromosome, complete genomedivalent anion:Na+ symporter (DASS) family protein1e-1791.3
NC_000909:597692:5976925976925989901299Methanocaldococcus jannaschii DSM 2661, complete genomemembrane bound transport protein, putative3e-1789.7
NC_011901:3363500:3385155338515533869961842Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeTrkA-C domain-containing protein5e-1789.4
NC_010814:1551624:1607954160795416097291776Geobacter lovleyi SZ, complete genomeTrkA-C domain protein1e-1687.8
NC_014297:476510:4765104765104783181809Halalkalicoccus jeotgali B3 chromosome, complete genomearsenite transport protein2e-1687.4
NC_015161:1748236:1751056175105617528371782Deinococcus proteolyticus MRP chromosome, complete genomeCitrate transporter3e-1686.3
NC_014759:4133809:4146497414649741482901794Marivirga tractuosa DSM 4126 chromosome, complete genomecitrate transporter8e-1685.1
NC_009707:36024:5459854598559651368Campylobacter jejuni subsp. doylei 269.97 chromosome, completeCitT protein9e-1685.1
NC_014829:4057318:4067423406742340691981776Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeTrkA-C domain protein1e-1585.1
NC_002516:4285477:4300117430011743019491833Pseudomonas aeruginosa PAO1, complete genomeprobable sodium:sulfate symporter5e-1582.8
NC_011770:1226923:1228025122802512298571833Pseudomonas aeruginosa LESB58, complete genomeputative sodium:sulfate symporter5e-1582.8
NC_018080:1100047:1102600110260011044321833Pseudomonas aeruginosa DK2 chromosome, complete genomesodium:sulfate symporter5e-1582.8
NC_008463:1223012:1224114122411412259461833Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative sodium/sulphate transporter4e-1582.8
NC_014926:608894:6143656143656161371773Thermovibrio ammonificans HB-1 chromosome, complete genomeTrkA-C domain protein4e-1582.8
NC_007963:1908964:1912082191208219138481767Chromohalobacter salexigens DSM 3043, complete genomeTrkA-like protein4e-1582.8
NC_009439:2038303:2051770205177020535331764Pseudomonas mendocina ymp, complete genomecitrate transporter6e-1582.4
NC_009092:2902171:2929103292910329304941392Shewanella loihica PV-4, complete genomeanion transporter5e-1582.4
NC_009434:608765:6376116376116394071797Pseudomonas stutzeri A1501, complete genomesodium/sulfate symporter family transporter5e-1479.3
NC_012881:2957309:2958478295847829602831806Desulfovibrio salexigens DSM 2638, complete genomeCitrate transporter5e-1479.3
NC_014541:1231021:1234607123460712359981392Ferrimonas balearica DSM 9799 chromosome, complete genomeanion transporter7e-1478.6
NC_013887:1462918:1480370148037014816681299Methanocaldococcus sp. FS406-22 chromosome, complete genomeanion transporter7e-1478.6
NC_013889:1740858:1765213176521317670331821Thioalkalivibrio sp. K90mix chromosome, complete genomeCitrate transporter3e-1377
NC_013156:573037:5919145919145932121299Methanocaldococcus fervens AG86, complete genomeanion transporter3e-1376.6
NC_011059:1896593:1908072190807219098531782Prosthecochloris aestuarii DSM 271, complete genomeTrkA-C domain protein6e-1375.5
NC_009615:919495:9332429332429347951554Parabacteroides distasonis ATCC 8503 chromosome, complete genomeNa+/sulfate symporter8e-1375.1
NC_009831:3583856:3583856358385635855831728Shewanella sediminis HAW-EB3, complete genomeTrkA-C domain protein9e-1375.1
NC_014371:177536:2179952179952194611467Prevotella melaninogenica ATCC 25845 chromosome chromosome II,transporter, divalent anion:Na+ symporter (DASS) family protein1e-1274.7
NC_011883:1601552:1620760162076016225891830Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,Citrate transporter3e-1273.2
NC_010519:71365:9273592735941231389Haemophilus somnus 2336 chromosome, complete genomeanion transporter6e-1272.4
NC_008309:190550:2195322195322209201389Haemophilus somnus 129PT, complete genomeconserved transporter, NadC family6e-1272.4
NC_008268:3162824:3182291318229131838981608Rhodococcus sp. RHA1, complete genomesodium symporter, ABC superfamily1e-1171.2
NC_008319:171847:2030882030882048421755Synechococcus sp. CC9311, complete genomeDi/tricarboxylate transporter2e-1170.9
NC_009831:3612206:3615825361582536175521728Shewanella sediminis HAW-EB3, complete genomeTrkA-C domain protein3e-1170.1
NC_013422:1604157:1621738162173816234771740Halothiobacillus neapolitanus c2, complete genomeTrkA-C domain protein4e-1169.7
NC_018691:1822731:1822731182273118245031773Alcanivorax dieselolei B5 chromosome, complete genomeTrkA-like protein9e-1168.6
NC_009337:715500:7373387373387391191782Chlorobium phaeovibrioides DSM 265 chromosome, complete genomeTrkA domain-containing protein9e-1168.6
NC_014836:155924:1559241559241577771854Desulfurispirillum indicum S5 chromosome, complete genomeCitrate transporter9e-1168.6
NC_007760:3948730:3948730394873039505411812Anaeromyxobacter dehalogenans 2CP-C, complete genomeTrkA-C1e-1067.8
NC_015216:328598:3459073459073473041398Methanobacterium sp. AL-21 chromosome, complete genomeanion transporter1e-1067.8
NC_009767:3335021:3338657333865733404741818Roseiflexus castenholzii DSM 13941, complete genomeTrkA-C domain protein2e-1067
NC_013166:194614:2138952138952157241830Kangiella koreensis DSM 16069, complete genomeTrkA-C domain protein4e-1066.2
NC_015731:1731896:1731896173189617336711776Nitrosomonas sp. Is79A3 chromosome, complete genomeTrkA-C domain-containing protein8e-1065.5
NC_014532:1579419:1579419157941915811821764Halomonas elongata DSM 2581, complete genomeTrkA-C domain protein1e-0964.7
NC_015318:981989:9888709888709905401671Hippea maritima DSM 10411 chromosome, complete genomeCitrate transporter2e-0963.9
NC_019902:1061432:1097802109780210996191818Thioalkalivibrio nitratireducens DSM 14787, complete genomeSLC13 permease family protein2e-0963.9
NC_017068:2569609:2569609256960925711531545Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative sodium-dependent dicarboxylate transporter2e-0963.9
NC_018000:1207231:1214567121456712163451779Sinorhizobium fredii USDA 257 chromosome, complete genometransporter3e-0963.5
NC_014392:1935130:1955771195577119570361266Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeCitrate transporter3e-0963.5
NC_010994:3666651:3682507368250736842491743Rhizobium etli CIAT 652, complete genomeputative transporter protein6e-0962.4
NC_009092:1599526:1638702163870216404291728Shewanella loihica PV-4, complete genomeTrkA-C domain protein2e-0860.8
NC_014634:28690:3242532425338461422Ilyobacter polytropus DSM 2926 plasmid pILYOP02, complete sequenceanion transporter5e-0859.3
NC_006138:857692:8633748633748652541881Desulfotalea psychrophila LSv54, complete genomesimilar to Na/dicarboxylate cotransporter9e-0858.5
NC_012850:3454270:3469578346957834713231746Rhizobium leguminosarum bv. trifolii WSM1325, complete genomeCitrate transporter9e-0858.5
NC_008380:4078670:4094511409451140962531743Rhizobium leguminosarum bv. viciae 3841, complete genomeputative transmembrane transporter protein2e-0757.4
NC_009033:653462:6651546651546664701317Staphylothermus marinus F1, complete genomeCitrate transporter2e-0757.4
NC_016599:513357:5311825311825325971416Owenweeksia hongkongensis DSM 17368 chromosome, complete genomeanion transporter3e-0757
NC_007645:2779381:2819300281930028210391740Hahella chejuensis KCTC 2396, complete genomeDi- and tricarboxylate transporters3e-0756.6
NC_016147:586433:5872725872725891431872Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeputative transmembrane transporter5e-0756.2
NC_007761:3564449:3581024358102435827661743Rhizobium etli CFN 42, complete genomeprobable cation transporter protein4e-0756.2
NC_015387:1803938:1837125183712518385551431Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeanion transporter5e-0755.8
NC_013009:122000:1386461386461403341689Neorickettsia risticii str. Illinois, complete genomeputative transporter2e-0653.9
NC_005945:4670978:4670978467097846723121335Bacillus anthracis str. Sterne, complete genomearsenical pump family protein8e-0652
NC_012472:2109719:2130993213099321324231431Bacillus cereus 03BB102, complete genomesodium/solute symporter family protein9e-0651.6