Pre_GI: BLASTP Hits

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Query: NC_003197:815964:823066 Salmonella typhimurium LT2, complete genome

Start: 823066, End: 823452, Length: 387

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016831:2209834:222265322226532223039387Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein5e-30129
NC_011294:781170:782219782219782605387Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein5e-30129
NC_011274:793681:800113800113800499387Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein5e-30129
NC_011205:839425:847250847250847636387Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853homeobox protein5e-30129
NC_011149:779903:786741786741787127387Salmonella enterica subsp. enterica serovar Agona str. SL483,putative homeobox protein9e-30128
NC_010102:2287934:230074823007482301134387Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein9e-30128
NC_011080:819103:827419827419827805387Salmonella enterica subsp. enterica serovar Newport str. SL254,putative homeobox protein9e-30128
NC_006905:848000:851711851711852097387Salmonella enterica subsp. enterica serovar Choleraesuis strputative homeobox protein9e-30128
NC_012125:793812:800266800266800652387Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein9e-30128
NC_016810:819489:822322822322822708387Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein9e-30128
NC_016856:819482:823408823408823794387Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein9e-30128
NC_016857:819429:822322822322822708387Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative homeobox protein9e-30128
NC_016860:857500:861896861896862282387Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein9e-30128
NC_016863:819478:823408823408823794387Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein9e-30128
NC_017046:819414:822307822307822693387Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein9e-30128
NC_011083:862901:871305871305871691387Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative homeobox protein4e-29126
NC_009648:838000:842502842502842867366Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative homeobox protein2e-0858.2