Pre_GI: BLASTP Hits

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Query: NC_003197:776238:778807 Salmonella typhimurium LT2, complete genome

Start: 778807, End: 779463, Length: 657

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:775636:778205778205778861657Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein5e-122436
NC_016863:776734:779303779303779959657Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative carboxylase5e-122436
NC_016860:816000:816860816860817516657Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein5e-122436
NC_016857:775649:778218778218778874657Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative carboxylase5e-122436
NC_016856:776735:779304779304779960657Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative carboxylase5e-122436
NC_016832:2201860:222285622228562223512657Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein5e-122436
NC_016810:775649:778218778218778874657Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein5e-122436
NC_004631:2205821:222609122260912226747657Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein5e-122436
NC_003198:751779:754348754348755004657Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein5e-121433
NC_011147:2085241:210626321062632106919657Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein6e-121432
NC_006511:2090058:211108021110802111736657Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein6e-121432
NC_011080:780850:783419783419784075657Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein6e-121432
NC_011083:824659:827228827228827884657Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein6e-121432
NC_010102:2322866:234457023445702345226657Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-121432
NC_011094:842038:844607844607845263657Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein7e-121432
CP002185:794732:814255814255814911657Escherichia coli W, complete genomepredicted enzyme subunit1e-107389
NC_012947:3077922:307957230795723080228657Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeallophanate hydrolase subunit 11e-107389
NC_012967:707083:724378724378725034657Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein1e-107389
NC_010468:3209326:321097632109763211632657Escherichia coli ATCC 8739, complete genomeAllophanate hydrolase subunit 13e-107387
NC_015224:1514747:153557515355751536231657Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein4e-91333
NC_009092:4585784:872287229408687Shewanella loihica PV-4, complete genomeAllophanate hydrolase subunit 11e-54212
NC_014910:1050706:106493310649331065616684Alicycliphilus denitrificans BC chromosome, complete genomeallophanate hydrolase subunit 11e-46186
NC_013522:736339:742230742230742970741Thermanaerovibrio acidaminovorans DSM 6589, complete genomeAllophanate hydrolase subunit 13e-44178
NC_012792:1091669:111340911134091114077669Variovorax paradoxus S110 chromosome 2, complete genomeAllophanate hydrolase subunit 15e-44177
NC_011894:957897:977579977579978244666Methylobacterium nodulans ORS 2060, complete genomeAllophanate hydrolase subunit 13e-41168
NC_009617:3184924:320796332079633208679717Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeallophanate hydrolase subunit 15e-41167
NC_014310:785220:788098788098788766669Ralstonia solanacearum PSI07 megaplasmid, complete sequenceallophanate hydrolase subunit 12e-40165
NC_017047:2957957:297755629775562978266711Rahnella aquatilis HX2 chromosome, complete genomeallophanate hydrolase subunit 16e-40164
NC_015061:2927707:294730629473062948016711Rahnella sp. Y9602 chromosome, complete genomeAllophanate hydrolase subunit 16e-40164
NC_011725:2949519:296069629606962961409714Bacillus cereus B4264 chromosome, complete genomehypothetical protein1e-39163
NC_014378:525717:533770533770534486717Acetohalobium arabaticum DSM 5501 chromosome, complete genomeAllophanate hydrolase subunit 19e-40163
NC_014011:527681:527681527681528436756Aminobacterium colombiense DSM 12261 chromosome, complete genomeAllophanate hydrolase subunit 12e-38158
NC_014632:1248611:124940412494041250159756Ilyobacter polytropus DSM 2926 chromosome, complete genomeallophanate hydrolase subunit 13e-38158
NC_013926:1205443:121838912183891219054666Aciduliprofundum boonei T469 chromosome, complete genomeAllophanate hydrolase subunit 11e-37156
NC_000961:888000:898800898800899477678Pyrococcus horikoshii OT3, complete genomehypothetical protein3e-36151
NC_006677:215466:228011228011228652642Gluconobacter oxydans 621H, complete genomehypothetical protein1e-35149
NC_013209:2248119:224811922481192248820702Acetobacter pasteurianus IFO 3283-01, complete genomeallophanate hydrolase subunit 13e-33141
NC_017111:2248096:224809622480962248797702Acetobacter pasteurianus IFO 3283-32, complete genomeallophanate hydrolase subunit 13e-33141
NC_002163:1471517:147401014740101474750741Campylobacter jejuni subsp. jejuni NCTC 11168, complete genomehypothetical protein5e-31134
NC_012962:484899:4890644890644907461683Photorhabdus asymbiotica, complete genomehypothetical protein7e-29127
NC_014934:4164603:418451441845144185251738Cellulophaga algicola DSM 14237 chromosome, complete genomehypothetical protein1e-28126
NC_013947:6678000:669798066979806698594615Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeAllophanate hydrolase subunit 17e-28124
NC_008571:2229369:225049522504952251226732Gramella forsetii KT0803, complete genomeallophanate hydrolase subunit 16e-27120
NC_010506:2146444:215989021598902160570681Shewanella woodyi ATCC 51908, complete genomeAllophanate hydrolase subunit 11e-26120
NC_004578:6089958:6112219611221961138381620Pseudomonas syringae pv. tomato str. DC3000, complete genomeallophanate hydrolase, putative1e-26119
NC_014008:1552679:156495315649531565594642Coraliomargarita akajimensis DSM 45221 chromosome, complete genomeAllophanate hydrolase subunit 13e-26118
NC_018000:1877183:1878889187888918804841596Sinorhizobium fredii USDA 257 chromosome, complete genomehypothetical protein2e-24112
NC_002516:2306776:232206823220682322781714Pseudomonas aeruginosa PAO1, complete genomehypothetical protein2e-24112
NC_012590:637651:6394756394756410221548Corynebacterium aurimucosum ATCC 700975, complete genomehypothetical protein3e-24112
NC_018644:516157:537998537998538717720Alpha proteobacterium HIMB59 chromosome, complete genomeAllophanate hydrolase subunit 13e-24111
NC_011886:177039:1995171995172012051689Arthrobacter chlorophenolicus A6, complete genomeurea amidolyase related protein4e-22104
NC_012522:3038890:305494530549453055658714Rhodococcus opacus B4, complete genomehypothetical protein2e-21102
NC_016582:93754:937549375494491738Streptomyces bingchenggensis BCW-1 chromosome, complete genomeallophanate hydrolase subunit 13e-1788.6
NC_012880:2778795:279660227966022797483882Dickeya dadantii Ech703, complete genomeAllophanate hydrolase subunit 12e-1375.9
NC_014323:4665610:471362947136294714528900Herbaspirillum seropedicae SmR1 chromosome, complete genomeallophanate hydrolase subunit 15e-1374.3
NC_012721:1686450:168558516855851686460876Burkholderia glumae BGR1 chromosome 2, complete genomeAllophanate hydrolase subunit 16e-1374.3
NC_015259:734795:763428763428764303876Polymorphum gilvum SL003B-26A1 chromosome, complete genomeAllophanate hydrolase, subunit 12e-1272.4
NC_012660:2143376:216897021689702169842873Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein4e-1271.6