Pre_GI: BLASTP Hits

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Query: NC_003197:332086:340755 Salmonella typhimurium LT2, complete genome

Start: 340755, End: 340952, Length: 198

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003198:331314:340209340209340913705Salmonella enterica subsp. enterica serovar Typhi str. CT18,3e-30130
NC_016863:332060:340729340729340926198Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative transposase4e-30129
NC_016860:332087:340756340756340953198Salmonella enterica subsp. enterica serovar Typhimurium strputative transposase4e-30129
NC_016857:329849:340233340233340430198Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative transposase4e-30129
NC_016856:332771:341440341440341637198Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative transposase4e-30129
NC_006511:2540500:256545325654532565650198Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein1e-28125
NC_012125:326909:335267335267335464198Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein1e-28125
NC_016832:2612809:262790126279012628068168Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Low calcium response locus protein S3e-1993.6
NC_003198:331314:349946349946350113168Salmonella enterica subsp. enterica serovar Typhi str. CT18,3e-1993.6
NC_004631:2615908:263100026310002631167168Salmonella enterica subsp. enterica serovar Typhi Ty2, complete3e-1993.6
NC_016810:329849:340233340233340373141Salmonella enterica subsp. enterica serovar Typhimurium str4e-1993.6
NC_006511:2540500:255572525557252555892168Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein1e-1891.7
NC_011147:2536000:255126125512612551428168Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein1e-1891.7
NC_011274:311843:339098339098339238141Salmonella enterica subsp. enterica serovar Gallinarum str. 287/912e-1788.2
NC_007946:2155454:216656921665692166835267Escherichia coli UTI89, complete genomeputative transposase2e-1580.9
NC_020181:421941:431668431668431934267Enterobacter aerogenes EA1509E, complete genomeFIG01046424: hypothetical protein2e-1580.9
NC_008253:2056734:206788120678812068147267Escherichia coli 536, complete genomeIS1400 transposase A2e-1580.9
NC_004431:2304280:231540423154042315670267Escherichia coli CFT073, complete genomeTransposase2e-1580.9
NC_009792:808332:817711817711817977267Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-1580.9
NC_013956:3273340:328860032886003288866267Pantoea ananatis LMG 20103 chromosome, complete genomeLcrS5e-1579.7
NC_011205:4718239:473601447360144736292279Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853transposase family protein6e-1579.3
NC_011274:4538722:455649445564944556772279Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91transposase6e-1579.3
NC_011294:4560902:457867645786764578954279Salmonella enterica subsp. enterica serovar Enteritidis strtransposase6e-1579.3
NC_016831:4517850:453582345358234536101279Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative transposase6e-1579.3
NC_014306:4106569:411578241157824116069288Erwinia billingiae Eb661, complete genomeIS1400 transposase A1e-1478.6
NC_011149:4677412:468962646896264689892267Salmonella enterica subsp. enterica serovar Agona str. SL483,transposase subfamily2e-1478.2
NC_003197:2894344:290706629070662907332267Salmonella typhimurium LT2, complete genomeputative transposase1e-1478.2
NC_011083:2847318:288157228815722881838267Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,transposase subfamily1e-1478.2
NC_016810:2871689:292964229296422929908267Salmonella enterica subsp. enterica serovar Typhimurium strputative transposase1e-1478.2
NC_016856:2896630:292730129273012927567267Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative transposase1e-1478.2
NC_016857:2871689:292964229296422929908267Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative transposase1e-1478.2
NC_016860:2917910:293063229306322930898267Salmonella enterica subsp. enterica serovar Typhimurium strputative transposase1e-1478.2
NC_016863:2844883:287555428755542875820267Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative transposase1e-1478.2
NC_017046:2896651:292838329283832928649267Salmonella enterica subsp. enterica serovar Typhimurium str. 798transposase1e-1478.2
NC_012779:916000:923638923638923904267Edwardsiella ictaluri 93-146, complete genometransposase subfamily1e-1478.2
NC_013592:804288:817801817801818067267Dickeya dadantii Ech586, complete genometransposase IS3/IS911 family protein4e-1477
NC_014618:2705769:271424527142452714511267Enterobacter cloacae SCF1 chromosome, complete genometransposase IS3/IS911 family protein4e-1476.6
NC_012731:1088321:109771710977171097983267Klebsiella pneumoniae NTUH-K2044 chromosome, complete genometransposase IS3/IS911 family protein4e-1476.6
NC_015761:520858:533068533068533334267Salmonella bongori NCTC 12419, complete genometransposase8e-1475.9
NC_021066:460292:494793494793495059267Raoultella ornithinolytica B6, complete genometransposase IS3/IS911 family protein1e-1375.1
NC_014500:3175283:320049432004943200760267Dickeya dadantii 3937 chromosome, complete genomeISEch8 OrfA1e-1375.1
NC_012917:2641000:264632926463292646613285Pectobacterium carotovorum subsp. carotovorum PC1, complete genometransposase IS3/IS911 family protein1e-1375.1
NC_010465:1790739:180366518036651803931267Yersinia pseudotuberculosis YPIII, complete genometransposase IS3/IS911 family protein3e-1373.9
NC_008800:2806827:284776428477642848051288Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,IS1400 transposase A3e-1373.9
NC_017047:3174588:319112931911293191395267Rahnella aquatilis HX2 chromosome, complete genomeIS1400 transposase A3e-1373.9
NC_015061:3111211:312652731265273126793267Rahnella sp. Y9602 chromosome, complete genometransposase IS3/IS911 family protein3e-1373.9
NC_012214:1212616:122529212252921225558267Erwinia pyrifoliae Ep1/96, complete genomeTransposase IS3/IS911, orf B9e-1372.4
NC_013971:3296272:330170733017073301931225Erwinia amylovora ATCC 49946 chromosome, complete genometransposase (partial)1e-1271.6
NC_013961:441719:469369469369469593225Erwinia amylovora, complete genomeInsertion element IS407 uncharacterized 10.0 kDa protein1e-1271.6
NC_015663:1:227752277523041267Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein3e-1270.5
NC_015663:1:116341163411900267Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein4e-1270.1
NC_014306:3006028:302442730244273024714288Erwinia billingiae Eb661, complete genomeIS1400 transposase A4e-1270.1
NC_011283:4966471:497889149788914979157267Klebsiella pneumoniae 342 chromosome, complete genomeIS3 family element, transposase orfA7e-1269.3
NC_016845:575123:594225594225594491267Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,IS3 family element, transposase orfA9e-1268.9
NC_012214:2805297:281364028136402813831192Erwinia pyrifoliae Ep1/96, complete genome1e-1168.6
NC_010694:3178842:318715831871583187406249Erwinia tasmaniensis, complete genomeTransposase, probable fragment3e-1063.5
NC_004547:1873390:190309019030901903356267Erwinia carotovora subsp. atroseptica SCRI1043, complete genometransposase1e-0962
NC_012214:3502992:350333335033333503599267Erwinia pyrifoliae Ep1/96, complete genometransposase2e-0961.2
NC_016818:3851542:387776238777623877950189Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completetransposase7e-0959.3
NC_013889:1202385:121241312124131212679267Thioalkalivibrio sp. K90mix chromosome, complete genometransposase IS3/IS911 family protein1e-0858.9
NC_011294:311796:320296320296320435140Salmonella enterica subsp. enterica serovar Enteritidis str1e-0858.5
NC_016816:1912366:192076619207661920882117Pantoea ananatis LMG 5342, complete genomeintegrase catalytic subunit2e-0858.2
NC_010688:2400471:241312824131282413394267Xanthomonas campestris pv. campestris, complete genomeISxcc1 transposase ORFA2e-0857.8
NC_003902:3666544:370052037005203700786267Xanthomonas campestris pv. campestris str. ATCC 33913, completeISxcc1 transposase2e-0857.8
NC_007086:1224867:124852212485221248788267Xanthomonas campestris pv. campestris str. 8004, complete genomeISxcc1 transposase2e-0857.8
NC_003902:3666544:371548837154883715754267Xanthomonas campestris pv. campestris str. ATCC 33913, completeISxcc1 transposase2e-0857.8
NC_010688:3487000:349347234934723493738267Xanthomonas campestris pv. campestris, complete genomeISxcc1 transposase ORFA2e-0857.8
NC_010688:2532929:254003525400352540301267Xanthomonas campestris pv. campestris, complete genomeISxcc1 transposase ORFA2e-0857.8
NC_010688:673454:689886689886690152267Xanthomonas campestris pv. campestris, complete genomeISxcc1 transposase ORFA2e-0857.4
NC_003902:4252000:425972142597214259987267Xanthomonas campestris pv. campestris str. ATCC 33913, completeISxcc1 transposase2e-0857.4
NC_007086:4610819:462419946241994624465267Xanthomonas campestris pv. campestris str. 8004, complete genomeISxcc1 transposase2e-0857.4
NC_003902:1858349:187637418763741876640267Xanthomonas campestris pv. campestris str. ATCC 33913, completeISxcc1 transposase2e-0857.4
NC_014844:511552:525714525714525980267Desulfovibrio aespoeensis Aspo-2 chromosome, complete genometransposase IS3/IS911 family protein3e-0857
NC_014844:659829:689165689165689479315Desulfovibrio aespoeensis Aspo-2 chromosome, complete genometransposase IS3/IS911 family protein3e-0857
NC_014844:1634985:164757916475791647845267Desulfovibrio aespoeensis Aspo-2 chromosome, complete genometransposase IS3/IS911 family protein4e-0857
NC_014844:762794:771527771527771793267Desulfovibrio aespoeensis Aspo-2 chromosome, complete genometransposase IS3/IS911 family protein4e-0857
NC_014844:3469848:348246734824673482733267Desulfovibrio aespoeensis Aspo-2 chromosome, complete genometransposase IS3/IS911 family protein4e-0857
NC_014844:2638994:264672026467202647034315Desulfovibrio aespoeensis Aspo-2 chromosome, complete genometransposase IS3/IS911 family protein4e-0857
NC_014844:2721746:276365227636522763966315Desulfovibrio aespoeensis Aspo-2 chromosome, complete genometransposase IS3/IS911 family protein4e-0857
NC_014844:2721746:273435727343572734671315Desulfovibrio aespoeensis Aspo-2 chromosome, complete genometransposase IS3/IS911 family protein4e-0857
NC_016010:1822212:184231218423121842578267Xanthomonas axonopodis pv. citrumelo F1 chromosome, completetransposase3e-0857
NC_007508:1517393:152852315285231528789267Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeISxcc1 transposase3e-0857
NC_007508:2072738:208287020828702083136267Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeISxcc1 transposase3e-0857
NC_016010:637535:654324654324654590267Xanthomonas axonopodis pv. citrumelo F1 chromosome, completetransposase3e-0857
NC_016010:1822212:183132918313291831595267Xanthomonas axonopodis pv. citrumelo F1 chromosome, completetransposase3e-0857
NC_016010:65949:777687776878034267Xanthomonas axonopodis pv. citrumelo F1 chromosome, completetransposase3e-0857
NC_007508:3835000:385099638509963851262267Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeISxcc1 transposase3e-0857
NC_016010:1169850:118291811829181183184267Xanthomonas axonopodis pv. citrumelo F1 chromosome, completetransposase3e-0857
NC_007508:2072738:208755420875542087820267Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeISxcc1 transposase3e-0857
NC_007508:1221500:124547712454771245743267Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeISxcc1 transposase3e-0857
NC_010688:3229820:325228232522823252548267Xanthomonas campestris pv. campestris, complete genomeISXcc1 transposase ORFA5e-0856.6
NC_011883:303980:318415318415318681267Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,transposase IS3/IS911 family protein1e-0755.5
NC_011883:519308:523664523664523930267Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,transposase IS3/IS911 family protein1e-0755.5
NC_011883:2826000:283608228360822836348267Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,transposase IS3/IS911 family protein1e-0755.5
NC_011883:2680380:268772426877242687990267Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,transposase IS3/IS911 family protein1e-0755.5
NC_012779:1966205:198580419858041985992189Edwardsiella ictaluri 93-146, complete genomehypothetical protein1e-0755.1
NC_011883:1478173:148645414864541486720267Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,transposase IS3/IS911 family protein1e-0755.1
NC_012731:2302974:231382723138272313931105Klebsiella pneumoniae NTUH-K2044 chromosome, complete genometransposase2e-0754.7
NC_010995:948041:973507973507973776270Cellvibrio japonicus Ueda107, complete genometransposase3e-0753.9
NC_009524:263587:279538279538279804267Psychrobacter sp. PRwf-1 chromosome, complete genometransposase IS3/IS911 family protein4e-0753.5
NC_010995:671389:675896675896676165270Cellvibrio japonicus Ueda107, complete genometransposase3e-0753.5
NC_013132:5250385:5261630526163052627411112Chitinophaga pinensis DSM 2588, complete genometransposase IS3/IS911 family protein5e-0753.1
NC_013132:4355363:4355363435536343564741112Chitinophaga pinensis DSM 2588, complete genometransposase IS3/IS911 family protein5e-0753.1
NC_013132:4355363:4377517437751743786281112Chitinophaga pinensis DSM 2588, complete genometransposase IS3/IS911 family protein5e-0753.1
NC_013132:4355363:4383253438325343843641112Chitinophaga pinensis DSM 2588, complete genometransposase IS3/IS911 family protein5e-0753.1
NC_013132:1652477:1655821165582116569321112Chitinophaga pinensis DSM 2588, complete genometransposase IS3/IS911 family protein5e-0753.1
NC_010170:209514:218226218226218492267Bordetella petrii, complete genomeputative transposase5e-0753.1
NC_016832:3858815:386983938698393869976138Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,IS1400 transposase A5e-0753.1
NC_003198:3881221:389555538955553895689135Salmonella enterica subsp. enterica serovar Typhi str. CT18,5e-0753.1
NC_003902:714478:734770734770735036267Xanthomonas campestris pv. campestris str. ATCC 33913, completeISxcc1 transposase4e-0753.1
NC_007086:4293405:430400043040004304266267Xanthomonas campestris pv. campestris str. 8004, complete genomeISxcc1 transposase4e-0753.1
NC_007925:4294472:429991142999114300171261Rhodopseudomonas palustris BisB18, complete genome7e-0752.8
NC_008543:259450:272968272968273234267Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetransposase IS3/IS911 family protein7e-0752.8
NC_012718:27089:391633916339429267Burkholderia glumae BGR1 plasmid bglu_2p, complete sequenceTransposase IS3/IS911 family protein7e-0752.8
NC_009256:277020:284614284614284880267Burkholderia vietnamiensis G4 chromosome 1, complete sequencetransposase IS3/IS911 family protein7e-0752.8
NC_014722:467287:483047483047483313267Burkholderia rhizoxinica HKI 454, complete genometransposase6e-0752.8
NC_003063:304962:324004324004324270267Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein8e-0752.4
NC_003305:1743939:175048817504881750754267Agrobacterium tumefaciens str. C58 chromosome linear, completeIS3 family transposase8e-0752.4
NC_014307:1:198411984120107267Ralstonia solanacearum CFBP2957 chromosome, complete genometransposase8e-0752.4
NC_003919:4618988:463908046390804639346267Xanthomonas axonopodis pv. citri str. 306, complete genomeISxac2 transposase8e-0752.4
NC_003919:2435058:245675024567502457016267Xanthomonas axonopodis pv. citri str. 306, complete genomeISxac2 transposase8e-0752.4
NC_007508:237771:268225268225268491267Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeISxac2 transposase8e-0752.4
NC_007508:1446526:145543014554301455696267Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeISxac2 transposase8e-0752.4
NC_003919:3812778:386436738643673864633267Xanthomonas axonopodis pv. citri str. 306, complete genomeISxac2 transposase8e-0752.4
NC_011891:4450031:446456744645674464833267Anaeromyxobacter dehalogenans 2CP-1, complete genometransposase IS3/IS911 family protein8e-0752.4
NC_011149:3863913:387769738776973877828132Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein1e-0652
NC_013132:7954000:7981185798118579822951111Chitinophaga pinensis DSM 2588, complete genometransposase IS3/IS911 family protein1e-0652
NC_009254:74000:935149351493792279Burkholderia vietnamiensis G4 chromosome 3, complete sequencetransposase IS3/IS911 family protein1e-0652
NC_013037:578000:589470589470589760291Dyadobacter fermentans DSM 18053, complete genometransposase IS3/IS911 family protein2e-0651.6
NC_013037:2851940:286059328605932860883291Dyadobacter fermentans DSM 18053, complete genometransposase IS3/IS911 family protein2e-0651.6
NC_013037:1015210:104192210419221042212291Dyadobacter fermentans DSM 18053, complete genometransposase IS3/IS911 family protein2e-0651.6
NC_007484:667879:683663683663683929267Nitrosococcus oceani ATCC 19707, complete genomeTransposase IS3/IS9112e-0651.6
NC_003919:2824000:282707428270742827340267Xanthomonas axonopodis pv. citri str. 306, complete genomeISxcd1 transposase1e-0651.6
NC_003919:1716831:173681417368141737080267Xanthomonas axonopodis pv. citri str. 306, complete genomeISxcd1 transposase1e-0651.6
NC_010170:4196197:420680842068084207194387Bordetella petrii, complete genomeputative transposase2e-0651.2
NC_014839:253961:2878792878792889591081Pantoea sp. At-9b plasmid pPAT9B02, complete sequence2e-0651.2
NC_011891:2800000:281715328171532817419267Anaeromyxobacter dehalogenans 2CP-1, complete genometransposase IS3/IS911 family protein2e-0651.2
NC_009428:1827352:184877818487781849041264Rhodobacter sphaeroides ATCC 17025 chromosome, complete genometransposase IS3/IS911 family protein2e-0651.2
NC_010170:4800000:484457048445704844836267Bordetella petrii, complete genomeputative transposase2e-0651.2
NC_010125:955863:982232982232982498267Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transposase2e-0650.8
NC_010125:1538335:155687815568781557144267Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transposase2e-0650.8
NC_010125:148500:162193162193162459267Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transposase2e-0650.8
NC_010125:2813653:282108328210832821349267Gluconacetobacter diazotrophicus PAl 5, complete genometransposase2e-0650.8
NC_010125:1051735:106658610665861066852267Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transposase2e-0650.8
NC_010125:148500:149527149527149793267Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transposase2e-0650.8
NC_010125:381711:390064390064390330267Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transposase2e-0650.8
NC_008751:2988235:301002730100273010293267Desulfovibrio vulgaris subsp. vulgaris DP4, complete genometransposase IS3/IS911 family protein2e-0650.8
NC_015224:2061951:206815920681592068431273Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative transposase2e-0650.8
NC_007508:689046:701794701794702060267Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeISxac2 transposase3e-0650.4
NC_007507:101887:116655116655116921267Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183,ISxac2 transposase (fragment)3e-0650.4
NC_007508:3865000:389879338987933899059267Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeISxac2 transposase3e-0650.4
NC_014216:2127370:213299121329912133257267Desulfurivibrio alkaliphilus AHT2 chromosome, complete genometransposase IS3/IS911 family protein5e-0649.7