Pre_GI: BLASTP Hits

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Query: NC_003197:2894344:2931213 Salmonella typhimurium LT2, complete genome

Start: 2931213, End: 2932226, Length: 1014

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:2943929:2952529295252929535421014Salmonella enterica subsp. enterica serovar Typhimurium str. 798cation transporter2e-159561
NC_011083:2847318:2905724290572429067371014Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,high-affinity nickel transport protein3e-159561
NC_011080:2897977:2907853290785329088661014Salmonella enterica subsp. enterica serovar Newport str. SL254,high-affinity nickel transport protein3e-159561
NC_011205:2962270:2975907297590729769201014Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853high-affinity nickel transport protein3e-159561
NC_011294:2802502:2816140281614028171531014Salmonella enterica subsp. enterica serovar Enteritidis strcation transporter3e-159561
NC_012125:2826624:2866428286642828674411014Salmonella enterica subsp. enterica serovar Paratyphi C strainnickel transporter3e-159561
NC_011149:2829811:2839674283967428406871014Salmonella enterica subsp. enterica serovar Agona str. SL483,high-affinity nickel transport protein2e-159561
NC_016810:2943912:2953789295378929548021014Salmonella enterica subsp. enterica serovar Typhimurium strputative cation transporter2e-159561
NC_016856:2896630:2951448295144829524611014Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative nickel transporter2e-159561
NC_016857:2943912:2953789295378929548021014Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative nickel transporter2e-159561
NC_016860:2917910:2954779295477929557921014Salmonella enterica subsp. enterica serovar Typhimurium strputative nickel transporter2e-159561
NC_016863:2844883:2899701289970129007141014Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative nickel transporter2e-159561
NC_016831:2779864:2793503279350327945161014Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative cation transporter7e-159560
NC_011094:2791719:2838340283834028393531014Salmonella enterica subsp. enterica serovar Schwarzengrund strhigh-affinity nickel transport protein1e-158559
NC_010102:2881714:2895355289535528963681014Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein9e-159559
NC_006905:2857699:2885896288589628869091014Salmonella enterica subsp. enterica serovar Choleraesuis strputative nickel transporter4e-158557
NC_003198:2769449:2784279278427927852891011Salmonella enterica subsp. enterica serovar Typhi str. CT18,7e-156550
NC_010067:171053:1763651763651773781014Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein8e-151533
NC_016832:2743801:275743227574322758337906Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Nickel transport protein2e-135482
NC_010465:1273000:1277611127761112786691059Yersinia pseudotuberculosis YPIII, complete genomehigh-affinity nickel-transporter3e-93342
NC_008150:2681327:2687829268782926888871059Yersinia pestis Antiqua, complete genomeputative nickel transport protein3e-93342
NC_010159:3779129:3783617378361737846751059Yersinia pestis Angola, complete genomehigh-affinity nickel transport protein3e-93342
NC_008149:1317109:1323611132361113246691059Yersinia pestis Nepal516, complete genomenickel transport protein3e-93342
NC_003143:2992295:2998797299879729998551059Yersinia pestis CO92, complete genomeputative nickel transport protein3e-93342
NC_004088:1387276:1393688139368813947701083Yersinia pestis KIM, complete genomenickel transport protein3e-93342
NC_005810:2739878:2746356274635627474381083Yersinia pestis biovar Microtus str. 91001, complete genomeputative nickel transport protein3e-93342
NC_009381:1783886:1796603179660317976611059Yersinia pestis Pestoides F chromosome, complete genomenickel transport protein3e-93342
NC_014029:3047506:3054008305400830550661059Yersinia pestis Z176003 chromosome, complete genomeputative nickel transport protein3e-93342
NC_009708:1284555:1289228128922812902861059Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehigh-affinity nickel transport protein2e-93342
NC_010634:3368000:3381668338166833827261059Yersinia pseudotuberculosis PB1/+, complete genomehigh-affinity nickel-transporter2e-93342
NC_006155:3456488:3468011346801134690691059Yersinia pseudotuberculosis IP 32953, complete genomeputative nickel transport (NiCoT family) protein2e-93342
NC_017265:3063016:3074542307454230756001059Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative nickel transport protein3e-93342
NC_017168:2751027:2762553276255327636111059Yersinia pestis A1122 chromosome, complete genomeputative nickel transport protein3e-93342
NC_017160:2976683:2978982297898229800401059Yersinia pestis D182038 chromosome, complete genomeputative nickel transport protein3e-93342
NC_017154:2999841:3011367301136730124251059Yersinia pestis D106004 chromosome, complete genomeputative nickel transport protein3e-93342
NC_013592:2059138:2068021206802120690461026Dickeya dadantii Ech586, complete genomehigh-affinity nickel-transporter1e-85316
NC_014618:1040381:1044296104429610453181023Enterobacter cloacae SCF1 chromosome, complete genomehigh-affinity nickel-transporter9e-72270
NC_014117:2684631:2687539268753926885581020Burkholderia sp. CCGE1002 chromosome chromosome 1, completehigh-affinity nickel-transporter7e-69261
NC_013209:2536500:2544897254489725459311035Acetobacter pasteurianus IFO 3283-01, complete genometransporter with high-affinity to nickel1e-63243
NC_017100:2538461:2546104254610425471381035Acetobacter pasteurianus IFO 3283-03, complete genometransporter with high-affinity to nickel1e-63243
NC_017108:2535798:2543441254344125444751035Acetobacter pasteurianus IFO 3283-12, complete genometransporter with high-affinity to nickel1e-63243
NC_017111:2535000:2543459254345925444931035Acetobacter pasteurianus IFO 3283-32, complete genometransporter with high-affinity to nickel1e-63243
NC_017121:2535803:2543446254344625444801035Acetobacter pasteurianus IFO 3283-07, complete genometransporter with high-affinity to nickel1e-63243
NC_017125:2538441:2546084254608425471181035Acetobacter pasteurianus IFO 3283-22, complete genometransporter with high-affinity to nickel1e-63243
NC_017146:2538483:2546126254612625471601035Acetobacter pasteurianus IFO 3283-26, complete genometransporter with high-affinity to nickel1e-63243
NC_012632:1212780:1229441122944112305351095Sulfolobus islandicus M.16.27 chromosome, complete genomehigh-affinity nickel-transporter3e-45182
NC_012588:1118945:1138990113899011400841095Sulfolobus islandicus M.14.25 chromosome, complete genomehigh-affinity nickel-transporter3e-45182
NC_003923:2794686:2806007280600728070231017Staphylococcus aureus subsp. aureus MW2, complete genomehypothetical protein2e-42173
NC_002953:2773000:2785347278534727863631017Staphylococcus aureus subsp. aureus MSSA476, complete genomeputative nickel transport protein2e-42173
NC_017275:927814:9451549451549462511098Sulfolobus islandicus HVE10/4 chromosome, complete genomehigh-affinity nickel-transporter2e-42173
NC_021182:1983456:2002176200217620031831008Clostridium pasteurianum BC1, complete genomehigh-affinity nickel-transporter, HoxN/HupN/NixA family1e-41170
NC_017273:352150:3828753828753839091035Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, completehigh-affinity nickel-transporter2e-37156
NC_008699:2260606:2271013227101322720561044Nocardioides sp. JS614, complete genomehigh-affinity nickel-transporter2e-27123
NC_010336:852915:870649870649871578930Francisella philomiragia subsp. philomiragia ATCC 25017, completehigh-affinity nickel-transporter2e-25116
NC_012803:361127:3765773765773776351059Micrococcus luteus NCTC 2665, complete genomehigh-affinity nickel-transporter, HoxN/HupN/NixA family1e-22107
NC_011886:404661:4180224180224190651044Arthrobacter chlorophenolicus A6, complete genomehigh-affinity nickel-transporter4e-1892.4
NC_015518:222000:222231222231222617387Acidianus hospitalis W1 chromosome, complete genomenickel transporter1e-1067.4