Pre_GI: BLASTP Hits

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Query: NC_003197:2894344:2928373 Salmonella typhimurium LT2, complete genome

Start: 2928373, End: 2929302, Length: 930

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:2844883:289686128968612897790930Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1virulence protein0644
NC_016860:2917910:295193929519392952868930Salmonella enterica subsp. enterica serovar Typhimurium strvirulence protein0644
NC_016857:2943912:295094929509492951878930Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74virulence protein0644
NC_016856:2896630:294860829486082949537930Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Svirulence protein0644
NC_016810:2943912:295094929509492951878930Salmonella enterica subsp. enterica serovar Typhimurium strvirulence protein0644
NC_003198:2769449:278143527814352782364930Salmonella enterica subsp. enterica serovar Typhi str. CT18,virulence protein0643
NC_004631:2755306:276729227672922768221930Salmonella enterica subsp. enterica serovar Typhi Ty2, completevirulence protein0643
NC_016832:2743801:275459127545912755520930Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein0643
NC_011083:2847318:290288329028832903812930Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,virulence protein0643
NC_006905:2857699:288305728830572883986930Salmonella enterica subsp. enterica serovar Choleraesuis strvirulence gene; homologous sequence to virK in Shigella0642
NC_011094:2791719:283549928354992836428930Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein0642
NC_012125:2826624:286358928635892864518930Salmonella enterica subsp. enterica serovar Paratyphi C strainvirulence protein0642
NC_011080:2897977:290501229050122905941930Salmonella enterica subsp. enterica serovar Newport str. SL254,virulence protein0641
NC_016831:2779864:279066227906622791591930Salmonella enterica subsp. enterica serovar Gallinarum/pullorumvirulence protein0639
NC_011294:2802502:281329928132992814228930Salmonella enterica subsp. enterica serovar Enteritidis strvirulence protein0639
NC_011274:2793355:280415228041522805081930Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91virulence protein0639
NC_011205:2962270:297306629730662973995930Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein0639
NC_011149:2829811:283683428368342837763930Salmonella enterica subsp. enterica serovar Agona str. SL483,virulence protein0638
NC_010102:2881714:289253528925352893443909Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-178625
NC_010067:171053:179299179299180234936Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein6e-170596
NC_017046:2943929:294969029496902950466777Salmonella enterica subsp. enterica serovar Typhimurium str. 798virulence protein2e-145514
NC_009790:42112:614456144562395951Escherichia coli E24377A plasmid pETEC_74, complete sequencehypothetical protein2e-79295
NC_007385:157516:158609158609159559951Shigella sonnei Ss046 plasmid pSS_046, complete sequenceVirK5e-79294
NC_007607:87000:880308803088980951Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequenceVirK5e-79294
NC_010660:175200:176293176293177243951Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequencehypothetical protein6e-79294
NC_017319:192482:193575193575194525951Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceVirK, required for proper localization of IcsA (VirG) at the surface of bacteria8e-79293
NC_004851:191709:193647193647194597951Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceVirK, required for proper localization of IcsA (VirG) at the surface of bacteria8e-79293
NC_017328:1075535:110263211026321103582951Shigella flexneri 2002017 chromosome, complete genomeVirK-like protein1e-78293
NC_011750:4947500:496427749642774965227951Escherichia coli IAI39 chromosome, complete genomeregulator of virG protein2e-78293
NC_007608:97092:981859818599135951Shigella boydii Sb227 plasmid pSB4_227, complete sequenceVirK5e-78291
NC_013282:1842412:186906918690691870001933Cronobacter turicensis, complete genomehypothetical protein2e-49196
NC_013892:3745749:374871537487153749650936Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein1e-48193
NC_020211:996497:102608110260811027010930Serratia marcescens WW4, complete genomehypothetical protein4e-48191
NC_017046:2943929:295043329504332950618186Salmonella enterica subsp. enterica serovar Typhimurium str. 798virulence protein9e-29127
NC_017068:2786391:279456827945682795470903Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein1e-1687.4
NC_015437:438538:453418453418454320903Selenomonas sputigena ATCC 35185 chromosome, complete genomeprotein of unknown function DUF5352e-1479.7
NC_008309:1553399:155339915533991554358960Haemophilus somnus 129PT, complete genomehypothetical protein3e-1479.3
NC_010278:398521:408686408686409558873Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,hypothetical protein3e-1376.3
NC_010939:405477:431568431568432440873Actinobacillus pleuropneumoniae serovar 7 str. AP76, completehypothetical protein3e-1376.3
NC_009053:393700:403856403856404728873Actinobacillus pleuropneumoniae L20, complete genomehypothetical protein3e-1376.3