Pre_GI: BLASTP Hits

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Query: NC_003197:2894344:2926802 Salmonella typhimurium LT2, complete genome

Start: 2926802, End: 2927854, Length: 1053

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016860:2917910:2950368295036829514201053Salmonella enterica subsp. enterica serovar Typhimurium strsecreted effector protein0711
NC_016856:2896630:2947037294703729480891053Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Ssecreted effector protein0711
NC_016810:2943912:2949378294937829504301053Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein0711
NC_017046:2943929:2948119294811929492311113Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein0711
NC_016857:2943912:2949378294937829504901113Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74effector protein pipB20711
NC_016863:2844883:2895290289529028963421053Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1secreted effector protein0708
NC_011294:2802502:2811728281172828127801053Salmonella enterica subsp. enterica serovar Enteritidis strexported protein0706
NC_011205:2962270:2971495297149529725951101Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853effector protein pipB20705
NC_016831:2779864:2789091278909127901911101Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein0703
NC_011083:2847318:2901312290131229024121101Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,effector protein pipB20703
NC_010102:2881714:2890943289094328920431101Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein0703
NC_012125:2826624:2862018286201828631301113Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein0700
NC_006905:2857699:2881486288148628825381053Salmonella enterica subsp. enterica serovar Choleraesuis strHomolog of pipB, putative pentapeptide repeats (8 copies)0699
NC_011080:2897977:2903442290344229045421101Salmonella enterica subsp. enterica serovar Newport str. SL254,effector protein pipB20687
NC_004631:2755306:2765723276572327667751053Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein0658
NC_003198:2769449:2779866277986627809181053Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein0658
NC_016832:2743801:2753022275302227541071086Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Secreted effector protein pipB20658
NC_011094:2791719:2833929283392928350291101Salmonella enterica subsp. enterica serovar Schwarzengrund streffector protein pipB20650
NC_011149:2829811:2835265283526528363171053Salmonella enterica subsp. enterica serovar Agona str. SL483,effector protein pipB20649
NC_010067:171053:1806711806711817261056Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein6e-146516
NC_016831:1950650:196061319606131961488876Salmonella enterica subsp. enterica serovar Gallinarum/pullorumpathogenicity island protein1e-29130
NC_011294:1048223:105429810542981055173876Salmonella enterica subsp. enterica serovar Enteritidis strpathogenicity island protein1e-29130
NC_011274:1057887:106358710635871064462876Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91pathogenicity island protein1e-29130
NC_011205:1147556:115494711549471155822876Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein1e-28127
NC_012125:2687980:269794326979432698818876Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein1e-28127
NC_010102:2020762:203071420307142031589876Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-28126
NC_011083:1173802:118117511811751182050876Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,secreted effector protein4e-28125
NC_003197:1170746:117645011764501177325876Salmonella typhimurium LT2, complete genomesecreted effector protein4e-28125
NC_016810:1126693:113277211327721133647876Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein4e-28125
NC_016856:1128715:113479411347941135669876Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Ssecreted effector protein4e-28125
NC_016857:1126693:113277211327721133647876Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74secreted effector protein4e-28125
NC_016860:1168431:117413511741351175010876Salmonella enterica subsp. enterica serovar Typhimurium strsecreted effector protein4e-28125
NC_016863:1128381:113408511340851134960876Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1secreted effector protein4e-28125
NC_010067:1829041:184535318453531846234882Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-28125
NC_011080:1166951:117878611787861179661876Salmonella enterica subsp. enterica serovar Newport str. SL254,secreted effector protein1e-27124
NC_006511:1808815:182100018210001821875876Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein9e-28124
NC_011147:1802535:181618318161831817058876Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein9e-28124
NC_017046:1127325:113302911330291133904876Salmonella enterica subsp. enterica serovar Typhimurium str. 798secreted effector protein2e-27123
NC_011094:1127983:113512211351221135997876Salmonella enterica subsp. enterica serovar Schwarzengrund strsecreted effector protein2e-27123
NC_016832:1880174:188988218898821890757876Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Secreted effector protein pipB4e-27122
NC_004631:1881214:189303218930321893907876Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein4e-27122
NC_003198:1078113:108690610869061087781876Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein4e-27122
NC_011149:1035990:104600510460051046880876Salmonella enterica subsp. enterica serovar Agona str. SL483,secreted effector protein6e-27121
NC_014834:3130715:317497831749783175799822Rhodopseudomonas palustris DX-1 chromosome, complete genomepentapeptide repeat-containing protein9e-25114
NC_009654:615504:6289616289616301211161Marinomonas sp. MWYL1, complete genomepentapeptide repeat-containing protein7e-23108
NC_003552:2318374:2330272233027223319541683Methanosarcina acetivorans C2A, complete genomehypothetical protein5e-21102
NC_007759:512477:5167495167495180741326Syntrophus aciditrophicus SB, complete genomepentapeptide repeat protein8e-21101
NC_008312:409830:4178494178494209503102Trichodesmium erythraeum IMS101, complete genomepentapeptide repeat3e-2099.4
NC_017277:1283477:129947812994781300473996Synechocystis sp. PCC 6803, complete genomehypothetical protein2e-1894
NC_000911:1284552:130066113006611301656996Synechocystis sp. PCC 6803, complete genomehypothetical protein2e-1894
NC_017052:1283720:129972112997211300671951Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein2e-1893.6
NC_017039:1283732:129973312997331300683951Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein2e-1893.6
NC_007626:1038214:1060439106043910620671629Magnetospirillum magneticum AMB-1, complete genomeUncharacterized low-complexity protein5e-1892.4
NC_014972:1126426:1127079112707911293432265Desulfobulbus propionicus DSM 2032 chromosome, complete genomepentapeptide repeat-containing protein7e-1891.7
NC_012440:1080675:110022611002261100858633Persephonella marina EX-H1, complete genomepentapeptide repeat protein1e-1791.3
NC_015416:2864917:2864917286491728677782862Methanosaeta concilii GP-6 chromosome, complete genomepentapeptide repeat-containing protein5e-1789
NC_009925:4864367:4883577488357748856852109Acaryochloris marina MBIC11017, complete genomeperiplasmic binding protein/LacI transcriptional regulator, putative1e-1687.8
NC_014965:1428902:1503902150390215059712070Vibrio vulnificus MO6-24/O chromosome I, complete sequencehypothetical protein2e-1686.7
NC_016626:1781956:1794926179492617971812256Burkholderia sp. YI23 plasmid byi_1p, complete sequencehypothetical protein6e-1685.5
NC_019748:1846500:185079818507981851457660Stanieria cyanosphaera PCC 7437, complete genomepentapeptide repeat protein6e-1685.1
NC_009921:5531972:5541797554179755430471251Frankia sp. EAN1pec, complete genomepentapeptide repeat protein6e-1685.1
NC_010511:3947948:3962914396291439641611248Methylobacterium sp. 4-46 chromosome, complete genomepentapeptide repeat-containing protein1e-1584.3
NC_009925:5737000:573826157382615739160900Acaryochloris marina MBIC11017, complete genomepentapeptide repeat protein1e-1584
NC_012779:610509:6295816295816308971317Edwardsiella ictaluri 93-146, complete genomehypothetical protein2e-1584
NC_009925:5737000:573763457376345738257624Acaryochloris marina MBIC11017, complete genomepentapeptide repeat protein7e-1581.6
NC_007298:750361:754988754988755635648Dechloromonas aromatica RCB, complete genomePentapeptide repeat1e-1481.3
NC_009927:253250:2585362585362601431608Acaryochloris marina MBIC11017 plasmid pREB2, complete sequencepentapeptide repeat protein2e-1480.5
NC_015497:3794000:379693637969363797847912Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomepentapeptide repeat protein2e-1480.5
NC_002939:2617037:263988126398812640645765Geobacter sulfurreducens PCA, complete genomepentapeptide repeat domain protein3e-1479.7
NC_013161:276000:276049276049276888840Cyanothece sp. PCC 8802, complete genomepentapeptide repeat protein4e-1479.3
NC_015656:1469501:1481584148158414829001317Frankia symbiont of Datisca glomerata chromosome, complete genomepentapeptide repeat-containing protein4e-1479.3
NC_013204:929434:9366239366239395382916Eggerthella lenta DSM 2243, complete genomepentapeptide repeat protein5e-1479
NC_011884:1541256:154345615434561544343888Cyanothece sp. PCC 7425, complete genomepentapeptide repeat protein6e-1478.6
NC_012988:1130227:113817411381741138974801Methylobacterium extorquens DM4, complete genomehypothetical protein2e-1377.4
NC_005125:2107088:212292221229222123746825Gloeobacter violaceus PCC 7421, complete genomehypothetical protein3e-1376.3
NC_009380:336024:341384341384342175792Salinispora tropica CNB-440 chromosome, complete genomepentapeptide repeat-containing protein7e-1375.1
NC_019757:4878417:4878417487841748815033087Cylindrospermum stagnale PCC 7417, complete genomeputative low-complexity protein9e-1374.7
NC_012962:1364638:1371030137103013735042475Photorhabdus asymbiotica, complete genomehypothetical protein9e-1374.7
NC_015865:3657:4118441184423141131Thermococcus sp. 4557 chromosome, complete genomeVoltage-gated potassium channel2e-1273.6
NC_009927:253250:267417267417268295879Acaryochloris marina MBIC11017 plasmid pREB2, complete sequencepentapeptide repeat protein2e-1273.6
NC_009925:5794495:581047758104775811361885Acaryochloris marina MBIC11017, complete genomepentapeptide repeat protein2e-1273.6
NC_010505:5077162:509017850901785090978801Methylobacterium radiotolerans JCM 2831, complete genomepentapeptide repeat protein3e-1272.8
NC_009925:5957806:598140659814065981987582Acaryochloris marina MBIC11017, complete genomepentapeptide repeat protein5e-1272.4
NC_007775:1153631:117359511735951174071477Synechococcus sp. JA-3-3Ab, complete genomepentapeptide repeat family protein5e-1272.4
NC_012804:903539:9148589148589159851128Thermococcus gammatolerans EJ3, complete genomeVoltage-gated potassium channel, putative6e-1272
NC_011884:5019500:505406650540665054563498Cyanothece sp. PCC 7425, complete genomepentapeptide repeat protein1e-1171.2
NC_009927:253250:2564332564332576261194Acaryochloris marina MBIC11017 plasmid pREB2, complete sequencepentapeptide repeat protein1e-1170.9
NC_010170:1661915:1675162167516216762111050Bordetella petrii, complete genomehypothetical protein1e-1170.9
NC_005125:2269343:227409522740952274931837Gloeobacter violaceus PCC 7421, complete genomehypothetical protein1e-1170.9
NC_016935:4367000:4369906436990643718491944Paenibacillus mucilaginosus 3016 chromosome, complete genomepentapeptide repeat-containing protein2e-1170.5
NC_015711:3546500:3552250355225035552012952Myxococcus fulvus HW-1 chromosome, complete genomepentapeptide repeat-containing protein3e-1169.7
NC_015663:4129685:4132881413288141354212541Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein7e-1168.6
NC_008576:2710500:26871822687182273193244751Magnetococcus sp. MC-1, complete genomeputative outer membrane adhesin like proteiin7e-1168.6
NC_019964:3028469:3034568303456830364721905Halovivax ruber XH-70, complete genomeputative low-complexity protein9e-1168.2
NC_015711:7471500:7489949748994974909561008Myxococcus fulvus HW-1 chromosome, complete genomepentapeptide repeat-containing protein2e-1067.4
NC_009921:593665:6069946069946082501257Frankia sp. EAN1pec, complete genomepentapeptide repeat protein2e-1066.6
NC_009927:253250:268311268311269240930Acaryochloris marina MBIC11017 plasmid pREB2, complete sequencepentapeptide repeat protein3e-1066.6
NC_013216:1335789:1351979135197913547682790Desulfotomaculum acetoxidans DSM 771, complete genomepentapeptide repeat protein3e-1066.2
NC_016816:1852659:1852659185265918551992541Pantoea ananatis LMG 5342, complete genomehypothetical protein4e-1065.9
NC_008095:8837612:885830988583098858920612Myxococcus xanthus DK 1622, complete genomepentapeptide repeat domain protein4e-1065.9
NC_019673:2051363:2080603208060320822431641Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein7e-1065.1
NC_019892:3086493:310280631028063103390585Singulisphaera acidiphila DSM 18658 chromosome, complete genomelow-complexity protein7e-1065.1
NC_009921:2605721:2619002261900226200871086Frankia sp. EAN1pec, complete genomepentapeptide repeat protein9e-1064.7
NC_015510:2907815:2919166291916629204221257Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomepentapeptide repeat-containing protein1e-0964.3
NC_019673:1420198:142189714218971422535639Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein2e-0963.9
NC_020064:4751097:4755751475575147582912541Serratia marcescens FGI94, complete genomeuncharacterized low-complexity protein2e-0963.5
NC_009881:724269:7242697242697271332865Rickettsia akari str. Hartford, complete genomeUncharacterized low-complexity protein2e-0963.2
NC_020126:7015976:7023392702339270285575166Myxococcus stipitatus DSM 14675, complete genomehypothetical protein3e-0962.8
NC_007413:868678:869853869853870311459Anabaena variabilis ATCC 29413, complete genomePentapeptide repeat5e-0962.4
NC_017058:671000:6873206873206902022883Rickettsia australis str. Cutlack chromosome, complete genomehypothetical protein5e-0962.4
NC_003155:5005913:500990350099035010520618Streptomyces avermitilis MA-4680, complete genomehypothetical protein9e-0961.6
NC_003272:5040500:505640450564045056862459Nostoc sp. PCC 7120, complete genomehypothetical protein1e-0861.2
NC_010170:1661915:1672533167253316751692637Bordetella petrii, complete genomeputative secreted protein1e-0860.8
NC_013510:3640776:3645961364596136514565496Thermomonospora curvata DSM 43183, complete genomemetallophosphoesterase2e-0860.8
NC_008278:2813362:282204228220422822899858Frankia alni ACN14a, complete genomehypothetical protein2e-0860.1
NC_020064:4751097:4754684475468447557541071Serratia marcescens FGI94, complete genomeputative low-complexity protein3e-0860.1
NC_010546:4786000:4788229478822947893321104Cyanothece sp. ATCC 51142 chromosome circular, complete sequencerfrA family pentapeptide repeat4e-0859.3
NC_009879:475500:4921194921194949892871Rickettsia canadensis str. McKiel, complete genomeUncharacterized low-complexity protein4e-0859.3
NC_016929:474000:4914334914334943032871Rickettsia canadensis str. CA410 chromosome, complete genomehypothetical protein5e-0858.9
NC_011894:7563668:7589150758915075903251176Methylobacterium nodulans ORS 2060, complete genomepentapeptide repeat protein5e-0858.9
NC_007517:2926792:293976729397672940255489Geobacter metallireducens GS-15, complete genomePentapeptide repeat protein3e-0756.6
NC_015690:2039215:204667620466762047545870Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein3e-0756.2
NC_016935:2567039:259539425953942596260867Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein3e-0756.2
NC_016114:3275004:328421832842183284925708Streptomyces flavogriseus ATCC 33331 chromosome, complete genomehypothetical protein5e-0755.8
NC_015690:790500:804645804645805514870Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein6e-0755.5
NC_016935:789849:805954805954806820867Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein7e-0755.1
NC_009092:521519:526823526823527494672Shewanella loihica PV-4, complete genomepentapeptide repeat protein1e-0654.7
NC_005125:182701:198027198027198509483Gloeobacter violaceus PCC 7421, complete genomehypothetical protein1e-0654.3
NC_011528:1769349:1788279178827917913983120Coxiella burnetii CbuK_Q154, complete genomeIcmE2e-0653.5
NC_017030:5558429:5589906558990655934423537Corallococcus coralloides DSM 2259 chromosome, complete genomeWD domain-/G-beta repeat-containing protein2e-0653.5
NC_002971:1545924:1564919156491915680233105Coxiella burnetii RSA 493, complete genomeIcmE protein2e-0653.5
NC_003272:784437:8097758097758118562082Nostoc sp. PCC 7120, complete genomehypothetical protein2e-0653.5
NC_017249:8221992:8253695825369582551761482Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein3e-0653.1
NC_004463:1992000:2004428200442820059091482Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein3e-0653.1
NC_014210:2638773:265437026543702655101732Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,pentapeptide repeat protein4e-0652.8
NC_015948:2704046:2713137271313727144531317Haloarcula hispanica ATCC 33960 chromosome chromosome I, completehypothetical protein5e-0652.4
NC_015976:2064387:207236920723692073097729Sphingobium sp. SYK-6, complete genomehypothetical protein7e-0652
NC_007516:413159:438995438995439714720Synechococcus sp. CC9605, complete genomehypothetical protein6e-0652
NC_018524:2338000:2346671234667123482421572Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomepentapeptide repeats family protein6e-0652
NC_016641:1148220:116637511663751166983609Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein6e-0652
NC_016816:1852659:1855196185519618562661071Pantoea ananatis LMG 5342, complete genomepentapeptide repeat-containing protein8e-0651.6
NC_018750:4333064:435787143578714358545675Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein8e-0651.6
NC_013530:423540:423540423540424115576Xylanimonas cellulosilytica DSM 15894, complete genomepentapeptide repeat protein8e-0651.6
NC_015052:1030708:104793410479341048617684Bifidobacterium longum subsp. infantis 157F, complete genomephage protein9e-0651.6
NC_015321:4287945:428919142891914290087897Fluviicola taffensis DSM 16823 chromosome, complete genomehelix-turn-helix domain-containing protein9e-0651.6
NC_016641:2394628:241582424158242416429606Paenibacillus terrae HPL-003 chromosome, complete genomepentapeptide repeat-containing protein9e-0651.6
NC_008319:478499:500678500678501367690Synechococcus sp. CC9311, complete genomepentapeptide repeat family protein1e-0551.2