Pre_GI: BLASTP Hits

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Query: NC_003197:2894344:2908420 Salmonella typhimurium LT2, complete genome

Start: 2908420, End: 2910402, Length: 1983

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:2896651:2929737292973729317191983Salmonella enterica subsp. enterica serovar Typhimurium str. 798DNA/RNA helicase01306
NC_011083:2847318:2882926288292628849081983Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative DNA/RNA helicase01306
NC_016810:2871689:2930996293099629329781983Salmonella enterica subsp. enterica serovar Typhimurium strputative DNA/RNA helicase01306
NC_016856:2896630:2928655292865529306371983Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative DNA/RNA helicase01306
NC_016857:2871689:2930996293099629329781983Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative DNA/RNA helicase01306
NC_016860:2917910:2931986293198629339681983Salmonella enterica subsp. enterica serovar Typhimurium strputative DNA/RNA helicase01306
NC_016863:2844883:2876908287690828788901983Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative DNA/RNA helicase01306
NC_008700:3927896:3932542393254239345301989Shewanella amazonensis SB2B, complete genomeconserved hypothetical protein0765
NC_004347:791897:7974217974217994091989Shewanella oneidensis MR-1, complete genomehypothetical protein0765
NC_015381:2109500:2118913211891321209312019Burkholderia gladioli BSR3 chromosome 1, complete sequenceputative ATP-dependent helicase2e-132473
NC_011830:4234392:4256074425607442581072034Desulfitobacterium hafniense DCB-2, complete genomeputative ATP-dependent helicase2e-114414
NC_013061:2288134:2312458231245823144461989Pedobacter heparinus DSM 2366, complete genomeputative ATP-dependent helicase1e-113410
NC_010939:1986263:2015298201529820173612064Actinobacillus pleuropneumoniae serovar 7 str. AP76, completePutative helicase7e-113408
NC_008767:927810:9397489397489418022055Neisseria meningitidis FAM18, complete genomeputative ATP-dependent helicase2e-107390
NC_010501:2511887:2535693253569325378552163Pseudomonas putida W619, complete genomehypothetical protein6e-23109
NC_012796:2090000:2099374209937421014372064Desulfovibrio magneticus RS-1, complete genomehypothetical protein8e-22105
NC_007651:72952:1071661071661093252160Burkholderia thailandensis E264 chromosome I, complete sequencehypothetical protein2e-1998.2
NC_011883:2680380:2690030269003026921382109Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,hypothetical protein5e-1996.7
NC_008344:2374761:2396574239657423987542181Nitrosomonas eutropha C91, complete genomehypothetical protein3e-1790.9
NC_002516:1474000:1486960148696014890952136Pseudomonas aeruginosa PAO1, complete genomehypothetical protein3e-1584.3
NC_006138:432000:4433824433824455082127Desulfotalea psychrophila LSv54, complete genomehypothetical protein5e-1583.2
NC_017030:4146937:4158009415800941601772169Corallococcus coralloides DSM 2259 chromosome, complete genomehypothetical protein2e-1481.3
NC_015943:171500:1841881841881863502163Haloarcula hispanica ATCC 33960 chromosome chromosome II, completeDNA/RNA helicase, superfamily I6e-1479.7