Pre_GI: BLASTP Hits

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Query: NC_003197:2894344:2907785 Salmonella typhimurium LT2, complete genome

Start: 2907785, End: 2908423, Length: 639

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:2844883:287627328762732876911639Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein4e-122436
NC_016860:2917910:293135129313512931989639Salmonella enterica subsp. enterica serovar Typhimurium strputative cytoplasmic protein4e-122436
NC_016857:2871689:293036129303612930999639Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein4e-122436
NC_016856:2896630:292802029280202928658639Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein4e-122436
NC_016810:2871689:293036129303612930999639Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein4e-122436
NC_008700:3927896:393189839318983932545648Shewanella amazonensis SB2B, complete genomeconserved hypothetical protein7e-41167
NC_004347:791897:796765796765797424660Shewanella oneidensis MR-1, complete genomehypothetical protein2e-36151
NC_008767:927810:939090939090939734645Neisseria meningitidis FAM18, complete genome6e-0857.8
NC_010939:1986263:201737420173742018030657Actinobacillus pleuropneumoniae serovar 7 str. AP76, completehypothetical protein2e-0652.8
NC_011830:4234392:425541342554134256090678Desulfitobacterium hafniense DCB-2, complete genomehypothetical protein6e-0650.8