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Query: NC_003197:2894344:2903614 Salmonella typhimurium LT2, complete genome

Start: 2903614, End: 2904897, Length: 1284

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:2844883:2872092287209228733751284Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative inner membrane protein0866
NC_011083:2847318:2878120287812028794421323Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative inner membrane protein0866
NC_016857:2871689:2926180292618029275021323Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative inner membrane protein0866
NC_016860:2917910:2927180292718029285021323Salmonella enterica subsp. enterica serovar Typhimurium strputative inner membrane protein0866
NC_017046:2896651:2924921292492129262431323Salmonella enterica subsp. enterica serovar Typhimurium str. 798inner membrane protein0866
NC_016810:2871689:2926180292618029274631284Salmonella enterica subsp. enterica serovar Typhimurium strputative inner membrane protein0866
NC_016856:2896630:2923839292383929251221284Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative inner membrane protein0866
NC_009659:1050532:1115491111549111167741284Janthinobacterium sp. Marseille chromosome, complete genomehypothetical protein3e-49196
NC_018868:619113:6639776639776653141338Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeputative inner membrane protein2e-41170
NC_006138:225832:255938255938256789852Desulfotalea psychrophila LSv54, complete genomesimilar to membrane proteins2e-28127
NC_018870:1953748:196123119612311962088858Thermacetogenium phaeum DSM 12270 chromosome, complete genomehypothetical protein5e-1479.3
NC_013169:513327:5307605307605320461287Kytococcus sedentarius DSM 20547, complete genomehypothetical protein2e-1170.5
NC_011146:482440:4940384940384954111374Geobacter bemidjiensis Bem, complete genomehypothetical protein7e-0755.8